Cynara cardunculus var. scolymus (artichoke): 112524132
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Entry
112524132 CDS
T05604
Name
(RefSeq) protein EXPORTIN 1A-like isoform X1
KO
K14290
exportin-1
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03008
Ribosome biogenesis in eukaryotes
ccav03013
Nucleocytoplasmic transport
ccav03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
112524132
03008 Ribosome biogenesis in eukaryotes
112524132
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
112524132
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccav03019
]
112524132
03009 Ribosome biogenesis [BR:
ccav03009
]
112524132
03016 Transfer RNA biogenesis [BR:
ccav03016
]
112524132
03036 Chromosome and associated proteins [BR:
ccav03036
]
112524132
Messenger RNA biogenesis [BR:
ccav03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
112524132
Ribosome biogenesis [BR:
ccav03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
112524132
Pre-60S particles
112524132
Transfer RNA biogenesis [BR:
ccav03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
112524132
Chromosome and associated proteins [BR:
ccav03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
112524132
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
CRM1_repeat
IBN_N
mTOR_dom
Motif
Other DBs
NCBI-GeneID:
112524132
NCBI-ProteinID:
XP_024989565
LinkDB
All DBs
Position
LG 13:complement(14256129..14271073)
Genome browser
AA seq
1076 aa
AA seq
DB search
MAAEKLRDLSQPIDVALLDATVAAFYGTGSKDERTAADHILRELQNNPDMWLQVVHILSS
AQSLNTKFFALQVLEGVIKYRWNVLPVEQRDGMKNYISDVIVKLSSNEGSFRQERLYVNK
LNIILVQILKHEWPARWRSFIPDLVAAAKTSETICENCMAILKLLSEEVFDFSRGEMTQQ
KIKELKQSLNSEFQLIHELCLYVLSASQRTELIRATLATLHAFLSWIPLGYIFESPLLET
LLKFFPVPSYRNLTLQCLTEVAALNFGDFYNLQYVKMYNIFMVQLQSVLPTSTNIPDAYA
NGSSEEQAFIQNLALFFTSFYKFHIRVLESTQENIAALLMGLEYLLSISYVDDTEVFKVC
LDYWNSLVLELFEANHNLDSPAATANMMGLQIPMIPGIADGLGTQLIQRRQLYAGSMSKL
RLLMVSRMAKPEEVLIVEDENGNIVRETLKDNDVLVQYKIMRETLIYLSHLDHDDTEKQM
LKKLSKQLNGEDWTWNNLNTLCWAIGSISGSMMEDQENRFLVMVIRDLLNLCEITKGKDN
KAVIASNIMYVVGQYPRFLRAHWKFLKTVVNKLFEFMHETHPGVQDMACDTFLKIVQKCK
RKFVIVQVGESEPFVSELLTSLPTTIQDLEPHQIHTFYESVGYMIQAESEISKREEYLQR
LMDLPNQKWTEIIGRARGSVDFLKDQDVIRTVLNILQTNTSAASALGTHFLSQITLIFLD
MLNVYKMYSELISSRIAEGGPYTSRTSYVKLLRSVKKETLKLIETFLDKAEDQPQIGRQF
VPPMMDPVLADYARNLPDARESEVLSLFATIINKYKGAMIVDVPRIFEAVFQCTLEMITK
NFEDYPEHRLKFFSLLRAIATHCFRALILLSPEQLKLVMDSVMWAFRHTERNIAETGLNL
LLEMLKNFQGSEFCNQFYRSYFVLIVQEIFAVLTDTFHKPGFKLHVLVLQHLFCLVESGS
LTEPLWDASTVPYPYPNNGVFVRECTIKLLSGSFPNIPASEVTKFVNGLFESRADLSIFK
NHIRDFLVQSKEFSAQDNKDLYAEEAAAEKERERQRMLSIPGLIAPNEIQDEMVDS
NT seq
3231 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggagaagcttagggatttaagtcagccgattgatgttgccttacttgatgct
accgttgctgccttctatggcaccggatctaaagacgagaggactgctgctgatcatata
ttgagggagttgcaaaacaatccagatatgtggcttcaagtggttcacattctgtccagt
gcacagagcttgaacaccaagttctttgctttacaggttcttgagggtgttattaagtat
agatggaatgtgttgcctgttgaacaacgggatgggatgaaaaattacatatctgatgtt
atagtaaagctttcaagtaacgagggttctttccgccaagaacggttgtatgttaacaaa
cttaacattatactagttcagattttgaagcatgagtggccagctaggtggcggagcttc
atccctgacctggttgcggcagcaaaaactagtgaaacaatttgtgagaactgcatggcg
atactgaaacttttaagtgaagaggtatttgatttctcaaggggtgaaatgactcaacag
aagatcaaggagcttaagcaatctctgaacagcgagtttcaactcattcatgaattatgc
ttatatgtactatcggcatctcaaagaacagagctgatcagggctacgctggccacatta
catgctttcctttcgtggattcctttgggctatatttttgaatccccactgttggagacg
ctccttaaattttttcctgtgccatcttatcgtaatctgactcttcagtgcttgacggag
gttgcagccctgaattttggagatttctacaacttgcaatatgttaaaatgtataacata
ttcatggtccagttgcagtccgttcttccaactagtacaaatataccggatgcatatgca
aatggctctagtgaggagcaggcatttattcagaatctggcattgtttttcacttcattt
tacaagtttcatatccgggtactggaatccacacaagagaacatagctgcactcttgatg
ggccttgagtatctcttgagcatttcttatgtggatgatacagaagtattcaaggtgtgc
ttggactattggaattccttggtgttagagcttttcgaggcaaaccacaatcttgatagc
cctgctgcaactgcaaacatgatgggactgcagattccaatgattcctggtatagctgat
ggtcttggtacacaactgatacaaagacggcaactatatgctggatcgatgtcaaaacta
agactgcttatggtatctcgcatggcgaaacctgaagaggttttaattgttgaagatgaa
aatgggaatattgttcgcgaaaccttgaaagacaatgatgtccttgttcagtataagata
atgagagaaacactgatctacttgtcacatcttgatcatgatgacactgaaaagcagatg
ctgaagaaactaagcaagcagctgaatggcgaggattggacatggaacaacttgaacaca
ctatgctgggcaataggatctatatctgggtccatgatggaagatcaggagaataggttt
ctcgtgatggttattcgtgatctactaaatctctgtgaaattactaaaggaaaggacaac
aaagctgttattgcaagtaatatcatgtatgttgttggacaatatccaagatttctgaga
gcccattggaagttcttgaaaactgttgtaaacaagttgtttgagttcatgcatgaaaca
catcctggggttcaggatatggcttgcgacacatttttgaaaattgtacagaaatgcaag
cgcaagttcgtcatagtgcaggttggagagagtgagccatttgtctcggaattgcttacc
agcctccctacaaccattcaagaccttgagcctcatcagatacatacattttatgaatct
gttggttatatgattcaagcagaatctgagatatcaaaacgggaggaatatttgcagagg
ctgatggatcttcccaatcagaaatggaccgagattataggacgtgcacgtggtagtgtg
gattttttaaaggatcaagatgtgattaggactgtgcttaatatattgcagacaaataca
agtgctgccagtgcactcggaacacattttttatctcaaataaccctcatctttttggac
atgcttaatgtctacaaaatgtacagtgagcttatatcatccagaattgctgaagggggc
ccctacacttctaggacttcctatgtgaaacttctgaggtctgtgaagaaggaaacgtta
aagctcattgagacttttctagataaggctgaagatcaaccacaaataggaaggcagttt
gtgcccccaatgatggatccagtgcttgctgattatgctcggaatttgcctgatgctcga
gaatcagaagttttgtctcttttcgccacaattattaacaagtacaagggtgcaatgata
gttgatgttccacgtatatttgaagctgttttccagtgcaccctggagatgataactaag
aattttgaagactaccctgaacaccggctcaagtttttttcattacttcgggccatagcc
acacattgtttcagagctttaatcttgttgtcacctgagcaattaaagcttgttatggat
tctgtcatgtgggctttccgacacactgaaagaaacattgctgaaactgggcttaatctg
ttgttagagatgctcaagaactttcagggttccgagttctgtaatcaattctaccggtct
tacttcgtgctgattgtgcaagaaatattcgctgttttgactgacacgttccataaacct
ggtttcaagttgcatgttttagtactgcagcacttattctgcctggtggagtcgggttca
ttgacggagcctttatgggatgcatccactgttccgtatccttatcctaataatggagta
tttgttcgggagtgcaccatcaagcttctgtctggctcttttcccaatattccagcatcg
gaggtaacgaaatttgttaacggactgtttgagtcgagagcggacctttctatattcaag
aaccacataagggactttctggtgcaatctaaagaattttcagcgcaggataacaaggat
ctgtatgcagaagaagctgctgctgagaaagagagagagagacagcggatgcttagcatt
cctggactaattgcacccaatgaaatacaagatgagatggttgactcataa
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integrated database retrieval system
