Cynara cardunculus var. scolymus (artichoke): 112524146
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Entry
112524146 CDS
T05604
Name
(RefSeq) protein NEDD1
KO
K16547
protein NEDD1
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccav03036
]
112524146
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ccav04812
]
112524146
Chromosome and associated proteins [BR:
ccav03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Other PCM proteins
112524146
Microtubules and associated factors
gamma-tubulin ring complex
112524146
Cytoskeleton proteins [BR:
ccav04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Gamma-tubulin complex components
112524146
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_THOC3
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_WDR3_1st
WD40_WDHD1_1st
Beta-prop_EML_2
WD40
Beta-prop_WDR36-Utp21_1st
WDR55
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR3_2nd
Beta-prop_EML
Beta-prop_WDR36-Utp21_2nd
WD40_RFWD3
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
WD40_Gbeta
ANAPC4_WD40
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_Aladin
Beta-prop_WDR35_TULP_N
Beta-prop_IFT122_1st
WD40_like
NBCH_WD40
NYD-SP28_assoc
CC_Bre1
Beta-prop_VPS8
PAN2_N
YabA
Motif
Other DBs
NCBI-GeneID:
112524146
NCBI-ProteinID:
XP_024989591
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Position
LG_13
Genome browser
AA seq
791 aa
AA seq
DB search
MNFTDPAMSLLAASGGDTVKLFDVSVDPGDPCILSHTPSPGSQVNSVKWNHTNLVVASAG
DDKRISLWRKNGQSMGTIPAAGSDSGDNIEESIFTINFSTKASRYICSGGSAQVVRIWDL
QRRRCIKWLKGHTDTITDVKYNCKDEHLASISLSGDLIIHNLASGARATELKDPNGQVLR
VLDYSRISRHLLVTAGDDGSVHLWDTTGRSPKVSWLKQHSAPTAGVSFSPSNDKMIASVG
LDKKLYTFDSGTRRPSFCIPYESPFSSVAFRDDGYTLAAGTTTGQVVFYDVRGKPQPFTV
LRAYANSEAVTSLCWQRSKPIFVNEKTCTADTALLGGTVDDSILMPDPLPSATMSSHLLS
TAIAGYRNSSRAGPSPESAPSTVASGSMSSSNDSSAGEETPLRSTLRAGGLARLHAPRSY
NYKDDMEVFSPLVEVQPITPSFDKLWGGTKTDFDKRTSLLFPSSKRFPLAPEVGSDPHSI
FDWKPNSTTIQDDSSTPVSRPATSPVSSKTDESPSITPPEAWGGERLSDKFVRPPRQSVT
LPSRFATLATSSSISSGSMLSGLQDLSLPSSQTAMNPVSSSSLSLANFRARDNSSNQESP
LGYSEGPFSSTSLSLGVKGTTNVESSGLALTPTRRFSSYAERISTNPSLSDGTSIAVGSP
KTKKTGAETREELLNSFSPRHEMSAATEPGFLPSMNGMDTQAQKTGLQGNSQQGSSFSLQ
LFQGTLEEALGSFQKSIHEDVRNLHIEVLRQFHMQEMQMTNAMSSLLENQAELMKEIQSL
RKENQELRQLL
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atgaacttcaccgatccagcaatgtcgcttttggccgctagcggaggagacaccgttaaa
ctctttgatgtttcggtggatcccggcgatccttgtattctcagccacacgccttcaccc
ggttctcaagttaactccgtaaagtggaaccatacaaatttggtggtggcaagtgctggt
gatgataaaaggatatctttatggcgaaagaatggtcaaagcatggggactattcctgca
gccggcagcgacagtggcgacaatatagaggagtctattttcactatcaactttagtacc
aaagcatctcgttacatttgttccggtggaagtgctcaagttgtgagaatatgggatttg
cagaggagaaggtgtataaagtggttgaagggccatacagacacaataacagatgtgaaa
tacaattgcaaagatgagcacttggcttccattagtcttagtggtgatcttataattcat
aaccttgcgtcgggagcgagggctactgaactcaaggatcctaatgggcaggtattgagg
gtgcttgattattcacggattagcagacaccttttagtgactgctggtgatgatgggtct
gttcacctgtgggatacaactggtcgcagcccaaaggtttcttggttaaagcagcattct
gcaccaactgctggtgttagtttttcaccatcgaatgacaagatgattgctagtgtggga
ctagataaaaagctatacactttcgactcaggaacaagaagaccctcattttgcattcca
tatgagtcacctttttcttcagtggcatttcgagatgatggatacacactggcagctggg
acaactactgggcaggtcgtattttatgatgtccgtggaaagccacaaccgtttactgtt
cttcgtgcttatgcaaattctgaggccgtcacaagtttatgctggcaaagatcaaaacct
atatttgtaaatgaaaaaacctgcacagcagatacggctctcctgggaggcactgtggat
gattcaatccttatgcccgacccacttccttcagcaacaatgtctagtcatttactctca
acagcgattgccggttatcgaaattctagtcgtgctgggccctctccagagtcagctccg
tcaacagttgctagtggatcaatgtcaagtagtaacgattcatctgcaggggaagaaaca
ccactccgaagcactcttagggctggcggattggctagattacatgccccacggagttac
aactacaaggatgacatggaggttttttctccacttgtagaagttcaacccattacaccc
tcatttgataagctgtgggggggaacaaaaaccgactttgataagaggacttctctgctg
tttccttcatccaagagattccctcttgcaccggaggttggcagtgatccgcattcgatt
tttgactggaaacctaactcaaccacaatacaggatgacagcagcactcctgtctctcgt
ccagcaacttctcctgtatcttccaaaaccgatgaatcaccatccattactcccccagaa
gcttggggtggtgagagattgtcggataagtttgtgcgcccgccacgtcagtcagtgacg
ctaccttctcgctttgcaacactggcaacttccagtagtatatcttcgggatccatgcta
tctggactccaagatcttagtttgccttcaagccaaacggctatgaaccccgtttcaagt
tcaagcttgagcttggctaatttccgagccagggataactcttctaatcaagagagtcct
ttaggatattctgaaggcccattcagctctacatctctttcacttggtgtgaaaggcact
actaacgtagaatcttcaggactagcgttgactccaacacgaagattttcaagttatgcc
gagaggataagcactaatccgtcgttaagtgatgggacatcaattgctgtgggttccccg
aaaacaaaaaagacaggagctgaaacaagggaagagcttttgaatagcttttcaccccgg
catgagatgtcggctgccacagaacctggatttcttccgtccatgaatggaatggataca
caagcccaaaaaacaggtttgcagggtaattcacagcagggatcttcgttctcacttcag
ctatttcaaggcactcttgaagaagctcttggttcttttcagaaatcgattcatgaagat
gttagaaatctgcatatcgaagttctaagacagtttcatatgcaggagatgcaaatgaca
aatgcaatgagttcacttttggaaaatcaggcagagcttatgaaggaaatccaatcttta
cgcaaagaaaaccaggaactccggcagcttttgtga
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