Cynara cardunculus var. scolymus (artichoke): 112524294
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Entry
112524294 CDS
T05604
Name
(RefSeq) transcription factor MYB16-like
KO
K09422
transcription factor MYB, plant
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccav03000
]
112524294
Transcription factors [BR:
ccav03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
112524294
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Myb_DNA-bind_7
HTH_Hrp3
Motif
Other DBs
NCBI-GeneID:
112524294
NCBI-ProteinID:
XP_024989832
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All DBs
Position
LG 13:3086882..3088178
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AA seq
328 aa
AA seq
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MRRSSSSVKKSGNDNDGLKKGPWTPEEDQKLLSYIQQFGQCSWRSLSAKAGLRRCGKSCR
LRWNNYLRPDIKKGNFSLEEERTIIQLHALLGNRWSAIATHLPKRTDSKIKNHWNSHIKK
RLAKMGIDPVTHKPKVDTPLHGSNLNHMTQWEAARLEAEARLVQQPNKHHPYQQPYLVSP
PSTHELHKRPTTTLPYLECLDVLKVWQGILKSKYLIHGGLQTLDSTWSVLKDVPLIRPTT
PMINNVESKGSLNEGATTKWYDKTETLMEPFEEYFMCPYDANITTEDYPQVKPQGFLEGC
LDLPINGGWSSVTNNLVMNAWPPASPVF
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgagaaggtccagcagcagtgtgaagaaaagcggaaacgacaacgatggattgaaaaaa
gggccatggacgccggaagaagaccaaaagctattgtcttatatccaacagtttgggcaa
tgcagttggcgctcattatctgctaaagctggtctcaggagatgtggaaagagttgtaga
ttgaggtggaataactacctcaggccagatataaaaaagggaaacttcagtttggaagaa
gaacggaccatcattcaactccatgctcttcttggtaacaggtggtcagctattgctact
cacttgccaaaaagaacagatagcaagatcaagaaccattggaactcacacatcaagaag
aggttggctaaaatgggtattgatccggtgacccacaagccaaaggttgacaccccactt
cacggctccaacctgaaccacatgactcaatgggaggctgctcggctagaagcagaggct
aggctagttcagcagcctaataaacatcatccttaccaacaaccctatctcgtatcacct
ccttcaactcatgagctccataaaaggcccaccacaacactaccatatttagaatgcctt
gatgtacttaaagtatggcaagggatattaaagtcaaagtatcttatccatggaggtctt
caaacacttgactcgacatggagtgtcctgaaagacgttcccctcataagacccactaca
cccatgattaacaatgtcgaaagcaagggttcattaaatgaaggggcgaccacaaaatgg
tatgataaaaccgaaaccctaatggagccgtttgaggaatatttcatgtgcccttacgat
gcaaatattactactgaagactatcctcaagtcaagcctcaaggtttcttggaaggctgt
cttgatcttcccattaatggtggatggagtagtgtcacaaataacttggtcatgaatgca
tggcctccagcttcgcctgtgttctag
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