Cynara cardunculus var. scolymus (artichoke): 112524297
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Entry
112524297 CDS
T05604
Name
(RefSeq) protein argonaute 7-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccav03019
]
112524297
03036 Chromosome and associated proteins [BR:
ccav03036
]
112524297
Messenger RNA biogenesis [BR:
ccav03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
112524297
Chromosome and associated proteins [BR:
ccav03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
112524297
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
112524297
microRNA pathway
RISC loading complex
112524297
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
TBCC_N
Motif
Other DBs
NCBI-GeneID:
112524297
NCBI-ProteinID:
XP_024989836
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Position
LG_13
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AA seq
863 aa
AA seq
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MDSKLQSLTVARRPDSGGSEGTMIALLANHFLVQFDPSQRIYHYDLEISPNPSKDIARLI
KQKLVEENSSVLSGVLPAYDGRRNLFSPIEFDKDKLELYINLPIPRNNSPMAANIEDSEE
KFKLFRVNIKIVSNLEGKKLRNYLSKGDESVPLPQDYLQALDVVLRENPTENCVLLGRSF
YPNLTRKDLGGGAIGVQGFYQSLRPTQQGLALNVDLSVTAFHESIGVIAYLQKRIHSLHD
LSERKTRGFSREEKKEAETVLKNIRVFVCHRETTERYQVHSLTDEPAANLQFRDRDGKNL
QIVNYFRDQYNYEIQFRNLPCLQTSRRRPCYLPMELCVICEGQKFLRKLSDDQTAKILEL
GCRKPKERKAIIDGVMAAPFSPSSGNQAGEFNLHVSREMTKLSGRILQPPKLKLGDGGNI
KDLIPSRHDRQWNLVGSHVFEGTQIARWALVSFGGTGDQKSTIPNFIDRLTRRCEQLGIY
LNKKTIISPQFESMQVLNNVNLLESKLKKIQRSASNNLQLLICVMEKKHKGYADLKRISE
TSIGVMSQCCLYQNLARLSSQFLANLAIKINAKIGGCTVALYTSLPAQIPRLLTLDEPVM
FMGADVTHPHPLDDFSPSVAAVVGSVNWPAANKYVSKMRSQTHRQEIIQDLSIMVEEILH
DFVRELSKLPKRVIFFRDGVSETQFHKVLRDELQAIRDAFSRFTGYNPPITFAVVQKRHH
TRLFPADPVSGAARNQFSDENVPPGTVVDSVITHPKEFDFYLCSHWGVKGTSRPIHYHIL
RDENEFTSDELQKLVYNLCFTFVRCTKPVSLVPPCYYAHLAAYRGRLYLNQTDRSSGFTR
SGSPKTTPLPKLQERVKNLMFYC
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atggattcaaaactgcaatcgttaacggttgcaagaaggccggattccggtggctccgaa
ggaaccatgatcgcccttttagccaatcatttcctagtccagttcgatccctcgcagcgt
atttaccattacgatctagaaatctccccgaatccttccaaggatattgctaggttgatt
aagcaaaaactagtagaagaaaactccagcgttctctccggcgtcctcccggcctatgat
ggcaggagaaatctttttagcccaatcgagttcgacaaagataagcttgaactttacatc
aaccttccaattccgagaaacaactctccgatggctgcaaatattgaagatagtgaagaa
aaattcaagctttttcgggtaaacatcaagattgtatccaatcttgaagggaagaaacta
agaaactatttgagtaaaggagatgaatcggtaccccttccacaagactatcttcaagct
ttggatgtcgttttacgcgaaaaccccacggaaaactgtgttcttttaggccgatctttt
tacccgaatttaacaagaaaagatcttggaggaggagcaattggagttcaaggtttttac
caaagtcttagaccaacacaacaaggtcttgctctcaatgttgacttatcggtcaccgcc
ttccatgagagcatcggagtgattgcttacttgcagaaacgtatccattcattgcacgat
ctttctgagcggaaaacgagaggttttagcagagaagagaaaaaggaagcggagaccgtg
ttgaaaaacatacgggtttttgtatgtcatcgagaaaccacagaaagatatcaagttcat
agcttgacggatgagccagcggcaaaccttcagtttcgagatcgagatgggaagaattta
cagattgtaaattattttcgtgatcagtataactatgagatacagttcaggaacttgcct
tgcttacagactagtcgaagaaggccatgttatcttcctatggagctttgtgtgatttgt
gaaggccagaagtttctcaggaagttatcggatgatcagactgcaaaaatactcgaactg
ggttgtcggaaaccaaaagaacggaaggcgatcatcgatggagtcatggctgcacccttc
agcccatcaagcggaaatcaagcaggggaattcaaccttcatgtttcaagggagatgaca
aagttgagtggaagaattctgcagcctccgaagcttaagctaggagatggaggcaatata
aaggacttgatcccttcacggcatgatcgacaatggaaccttgtcggtagccatgtgttc
gaaggaacccaaattgcgagatgggctctggttagtttcggtggcaccggtgaccagaag
tcgaccatcccaaatttcatcgatcggctaactcgaaggtgtgagcaattagggatctat
ctcaacaagaaaacaatcataagcccacagtttgaatcaatgcaagttcttaacaatgtg
aatcttcttgaatcaaagctcaaaaagatccaaagatctgcatctaataatctgcagctt
ttgatttgtgtgatggaaaagaaacacaaaggttatgcagatttgaagcggataagcgaa
accagcatcggggttatgagccagtgttgtttgtatcaaaatcttgcgagattaagctcg
cagtttctcgcgaatttggcaatcaagatcaatgccaagatcggtgggtgcaccgtggct
ctgtacacgtcgttgccagctcagatcccgcggcttctgaccctcgatgagccggtgatg
tttatgggtgcggatgtaacacacccgcacccacttgacgatttcagcccgtcggtggcg
gctgtggtcgggtcggtgaactggccggcagctaacaagtacgtttccaaaatgcgatct
cagactcaccggcaagaaattattcaagacttgagtataatggtggaagagatactacat
gatttcgtccgggagctttcgaagctgccgaaacgagtgattttctttcgggatggcgtg
agtgagacgcagtttcataaggtgcttcgtgacgaattgcaagcgattcgggatgcattt
tcgcgtttcaccggctacaacccgccgatcacgtttgccgtggtccagaaacggcaccac
acacggctgttccctgcggacccggtatctggtgctgcccgaaaccagttttccgacgag
aacgtgccgccaggcacggtggttgactcggtcatcacccacccgaaagaatttgacttc
tatctatgcagccattggggtgtcaagggtactagccggccgatacattatcacattcta
cgcgatgaaaatgagttcacttctgatgaacttcagaaacttgtttacaatctttgcttc
acctttgtgaggtgcactaaacctgtctctttggtgcctccttgttactatgctcatctt
gctgcttaccgaggccgattgtacctcaatcaaaccgacaggtcgtcgggttttacaaga
agtggttcaccgaagaccacaccgctcccaaaactccaagagcgggtcaagaatctcatg
ttctactgctga
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