Cynara cardunculus var. scolymus (artichoke): 112524314
Help
Entry
112524314 CDS
T05604
Name
(RefSeq) cyclin-T1-3-like isoform X1
KO
K15188
cyclin T
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
112524314
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccav03021
]
112524314
Transcription machinery [BR:
ccav03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Super elongation complex (SEC)
112524314
Brd4/P-TEFb complex
112524314
7SK RNP complex
112524314
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cyclin_N
CycT2-like_C
Cyclin_C
TFIIB
Zn_Tnp_IS91
Motif
Other DBs
NCBI-GeneID:
112524314
NCBI-ProteinID:
XP_024989856
LinkDB
All DBs
Position
LG 13:11446534..11452439
Genome browser
AA seq
508 aa
AA seq
DB search
MLWNLEEKIGAVWLLNWHPFSIRATSSASIAAPIQCYKSQEADAAGMLMSGAPQPPTRRW
YFSRKDIECHTPSRSDGIDFKQEQHLQKLYCFFLQELGIELKVPQVTIATAMMFCHRFYM
RQSHAKNDWQTIATVCMFLACKAEETPRWLGELVVVAYKLIYKWDPSASRRIREIYDKQK
ELILIGERLLLATIAFDLNIEHPYKSLVAALKRLGITHKELVKVAWNFVNDWLRTSLCLQ
HKPHYIAAGSLFLAAKVKKVKLPTAKGKAWWMEFDVSPKQLEDVIQQMMSLWEQSQSQTL
TLKDQNVTESLIRKATIYSPQSSTLSGSSIVQDSKMTASMDAGGPAKAATSNCVKKQAFD
NVHDTSRETINCHTSDSGSAKDVTSDCVKKHAFDNVQGASKETPNCQTSDTGSAVSVVED
GDSGEPVTVKSDLSSSCKIVSVGGIVGNGQVDVNRIREKLKKRNFVKTMKRKHVEDLDDE
IDGEAWIERELEDGIVLESSYAQKQIKI
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgctttggaacctggaggagaaaataggggctgtgtggcttctcaattggcatcccttt
tcaataagagcaacttcttcagcttcaatcgcagctccaattcaatgctataaatcccaa
gaagctgatgcagctggaatgcttatgtctggagcacctcagcctcctactcgcaggtgg
tatttcagcaggaaagacatagaatgtcatactccatcaaggtctgatggcatcgatttc
aagcaggaacagcatctacaaaagctgtactgcttttttctgcaagagcttggcatagag
cttaaagtgccccaggtaacaatagcaacagcaatgatgttttgccatcggttttacatg
cggcagtcccatgcgaagaatgattggcagacaattgcaactgtatgcatgttccttgct
tgcaaagctgaagaaacgccacgatggttaggtgaacttgttgtggtggcttataagtta
atatacaagtgggatccttcagcttcacggagaattcgggagatatatgataaacagaag
gaactaatcttaattggggaaagacttctcttggctactattgcgtttgatctgaatata
gaacatccatacaagtcacttgttgcggctcttaagagattgggtattacacacaaagaa
cttgtaaaagtagcatggaattttgtgaatgactggctccgtacctcactgtgcttgcag
cacaaaccccattatattgccgctggttctctgtttcttgctgccaaggttaagaaggtg
aaattacctacagcaaaagggaaggcttggtggatggaatttgatgtttcacccaagcaa
ttagaagatgtcatccaacagatgatgagtttgtgggaacagagtcagagccaaacccta
acactgaaggatcagaatgtaactgaatctctaatcagaaaagcgacaatctatagtcca
caatcctccactttgagtggctctagtattgttcaggattccaagatgaccgcttctatg
gatgctggtggacctgcaaaagctgcaacgtctaattgtgtcaagaaacaggcctttgac
aacgtccatgatacatccagagaaacaataaattgtcataccagtgatagtggcagtgca
aaagatgtgacatctgactgtgtcaagaaacacgcttttgacaatgtccaaggtgcatca
aaggaaacaccaaattgccaaaccagtgataccggcagtgcagttagtgttgttgaggat
ggcgatagtggtgaacctgtcacagtgaagtctgatctaagttcaagttgcaagatagtt
tcagtgggaggtatagttggcaatggccaggtagatgtaaatcgaatcagagaaaagctt
aagaaaaggaattttgttaaaactatgaaaagaaagcacgtagaagacttggatgatgaa
atcgatggtgaagcctggatagagagagagttggaggatggcatagtgctggaatcttca
tatgctcagaagcaaatcaagatttaa
DBGET
integrated database retrieval system
