Cynara cardunculus var. scolymus (artichoke): 112524459
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Entry
112524459 CDS
T05604
Name
(RefSeq) tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit trm6 isoform X1
KO
K03256
tRNA (adenine58-N1)-methyltransferase non-catalytic subunit
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccav03016
]
112524459
Transfer RNA biogenesis [BR:
ccav03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
112524459
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Gcd10p
Motif
Other DBs
NCBI-GeneID:
112524459
NCBI-ProteinID:
XP_024990051
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Position
LG 1:47716974..47729792
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AA seq
449 aa
AA seq
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MSTLEQENHSNENRRITWEGCSVLLDINDGDRLVFSRLTAGSIVKIGNKNYPLQPLIGCP
FGSLFQVENGANGPCLSRVISTAEVSNDEDKKECDLKDESRDNRALIDNNTAQTLTGDDI
EGMRRQGASGNEIVEALIANSATFENKTSFSQEKYRLKKQKKYAPKVLLRRPFARSICDT
YFKKYPSRIGFLRVDTLSLLLSFANVTAHSDVLVVDMIGGILTGAVAERLGGTGYVCNTY
RGDSPSSIEIVRIFNFGDEINKRIVRLPLADLSAPPNADSKDMELLQASGSVDNPTNQSD
PVSMEETTVSSKDGRPTTETVASKVHKAAKPGEKASEDAIKLWKENGFSSLIIAAPEVDA
WGIVKEVLPFLSFSAPFVIYHQYLQPLATCMHNLQVEKMAIGLQITEPWLREYQVLPSRT
HPHMQMSACGGYVLSGTKIYNDNQPDKSI
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacactcgaacaagaaaatcattcaaacgaaaaccgtagaatcacctgggaaggt
tgcagcgttttgcttgatatcaacgatggtgatcgccttgttttctctcgcctcaccgct
ggctcgattgtgaaaattgggaacaagaattacccacttcagccattgattgggtgtcca
tttggttctctgtttcaagtagaaaatggggcaaatggtccttgcttgtcgcgggtaatt
tcaactgcagaagttagtaatgatgaagacaagaaggaatgtgatttaaaggatgagtcg
agggacaaccgtgcattgattgacaataatacagcccaaacactcactggggatgatata
gaaggaatgcgaagacagggtgcaagtgggaacgagatagttgaagctctaatagcgaac
agtgcaacatttgagaataaaacatccttttcacaagaaaagtataggcttaagaaacag
aagaagtatgctcctaaagtactcttgagacgtcccttcgcccggagtatatgtgacact
tactttaagaagtatccatcaagaattgggttcttgcgagttgacacattatctcttctt
ctttcatttgctaatgtcactgcacattctgatgttcttgtggtggatatgattggcggt
atacttactggtgctgttgcagaacgcctgggaggtactggttatgtgtgcaatacctat
cgtggtgattctccatcttctattgagatagtacggatattcaactttggtgatgaaatt
aacaaaaggattgtgaggttgcctcttgctgatctttctgctcctccaaatgcagattcc
aaagatatggaactgcttcaagcttctggtagtgttgataatccaaccaatcagtctgat
cctgttagcatggaagagaccacagtgtcatctaaagatgggaggcctactaccgagact
gttgcctcaaaagtacataaagctgccaaaccaggagaaaaagcttctgaagatgccatt
aagttgtggaaagaaaatggattttcaagcctcataattgctgctccagaagtggatgct
tggggtattgtcaaggaggtcctaccatttctatctttttcagctccctttgtgatttac
caccagtatcttcagccattggcaacatgcatgcacaatctccaggttgagaaaatggca
atcggcttgcaaattacagaaccgtggctacgtgaatatcaggttcttccttcaagaact
cacccccacatgcagatgagtgcgtgtggtgggtacgtgttgagcggaactaaaatatac
aatgacaatcaacccgacaagtccatctga
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