Cynara cardunculus var. scolymus (artichoke): 112524550
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Entry
112524550 CDS
T05604
Name
(RefSeq) transcription factor MYB41-like
KO
K09422
transcription factor MYB, plant
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccav03000
]
112524550
Transcription factors [BR:
ccav03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
112524550
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
HTH_Hrp3
IntS14_b-barrel
Motif
Other DBs
NCBI-GeneID:
112524550
NCBI-ProteinID:
XP_024990180
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All DBs
Position
LG 13:complement(39259741..39261218)
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AA seq
336 aa
AA seq
DB search
MGRSPCCDKNGLKKGPWTQEEDLKLLEYIQVHGPGNWRTLPKNAGLQRCGKSCRLRWTNY
LRPDIKRGRFSFEEEETIIQLHSVLGNKWSSIAARLPGRTDNEIKNYWNTHIRKRLLRNG
IDPVTHSPRLDLLDISSMLNSAQLNLSNLLNLQTLVNPEVLRLATLLASSSNQENQELFL
NNQMNPMNQTLDQQLPNCSSIAPRLSSTQLLSQESHSQYFSPNFVNMNGQIVEENVMSPC
LTHNHVILPSQSDQYRAQASENSSVQKSNIEHNYNHTSQNFNFDSVLSTPMSSPTPLNSS
STFVNSSSTEDERETYCSMFKFEIPESFEFDDFINS
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgggaagatcaccgtgttgcgataaaaatggactcaagaaaggtccatggacacaagaa
gaagatctcaaacttttggagtatattcaagtacatggacctggcaattggcgaaccctc
cccaagaatgctggacttcaacggtgtggaaagagttgtcgtcttaggtggacaaactac
ttgaggcctgatatcaagagaggaagattctcatttgaagaagaagaaactatcattcaa
cttcatagtgtgctggggaataagtggtcatcgatcgctgctcggttgcctggaagaacg
gacaatgaaatcaagaactactggaacacccacattcggaaaaggctactcaggaatggg
attgatccagtgactcatagtcctcgcctcgatctacttgacatctcttccatgctcaac
tcagcccagcttaatctctcaaaccttttgaacctccagacacttgtaaatccagaagtt
ctaaggcttgcgactctactagcatcatcatcaaatcaagagaaccaagagttgtttcta
aataaccaaatgaatcctatgaaccaaacccttgatcagcagcttccaaactgcagttct
atcgcgccaagactttcaagcactcagcttttgagtcaagagagtcatagtcagtatttt
tcaccaaactttgttaacatgaatgggcaaatcgttgaagaaaatgtgatgtccccatgc
ttaacccataatcatgttatcctcccaagtcaaagtgatcaatatagggcacaagcatca
gagaactcgagtgtccagaaatcaaatatagaacacaactacaaccacaccagccagaat
ttcaactttgattcagttttatcgacgcccatgtcaagtcctacgccactaaactcatca
tcaacctttgtcaacagcagcagcacggaggatgagagagagacttactgcagcatgttt
aagtttgagattccagagagctttgagtttgatgatttcattaatagttag
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