Cynara cardunculus var. scolymus (artichoke): 112524552
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Entry
112524552 CDS
T05604
Name
(RefSeq) AP3-complex subunit beta-A isoform X1
KO
K12397
AP-3 complex subunit beta
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
112524552
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccav04131
]
112524552
Membrane trafficking [BR:
ccav04131
]
Endosome - Lysosome transport
Others
AP-3 complex
112524552
Endosome - Golgi transport
112524552
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Cnd1
AP3B1_C
AP3B1_C_2
HEAT_2
INTS1_R4
Svf1_C
Motif
Other DBs
NCBI-GeneID:
112524552
NCBI-ProteinID:
XP_024990182
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All DBs
Position
LG 13:11941450..11957787
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AA seq
1135 aa
AA seq
DB search
MFTQFGSTAENFSKASTMVFRIGTDAHLYDDPDDVSISPLLDSKFDSEKCEALKRLLALI
AQGLDVSNYFPQVVKNVASQSLEVKKLVYLYLLHYAERRPNEALLSINIFQRDLGDPNPL
VRAWALRTMAGIRLHVISPLVLVAVRKCARDPSVYVRKCAANALPKVHDLRLEENATAII
EIIGILLYDNSPGVVGAAAAAFASVCPNNLPLIGRNYTRLCEILPDVEEWGQIILIGILL
RYVIARQGLAKESIMLSLCPEDVSHDKSGSDFDTNSLEMNKTYEMSSGIQEHELAAMVSR
SYLEGPDKYLSHSTNADVMSSELDSSRFTSSKSDDDMKILLQCTSPLLWSRNSAVVLAAA
GVHWIMAPRKDIAKIVKPLLFLLRSSDASKYVVLCNIQVFAKVMPSLFTPHYEDFFINSS
DAYQVKALKLEILSSIATDASISVIFQEFQDYVSDPDRRFAADTVAAIGLCAKRNPQVAN
TCLEGLLALTSPKSVNSTSGSTDDEAVVLVQAITSIKDIIKQDPSSHDKAIIYLAQNLDA
IKVPVARAMIVWIVGEYNSIGNIIPKMVSVILRYLARSFPSESIETKHQILNAAVKVLLS
SKGEDFHTARSILSYVLELAKFDLNYDVRDRARILRKLLSCFYVSSSGLEEESSQKSENN
ELPLLLAEHVFGEKITSSEMVNNRFYLPGSLSQIVLHAAPGYEPLPEPCSLTELDIIEGM
KISEEGPTQVGSYEVDNSDVDSGSLNEEGSYSYDSEDSITSSRGTDNTNEGAAREADNTD
SLINFSDVGKAQKEIEVSEENDFHGELMSKGALESWLDDNPSSSQNVPEMDNERSSSARI
SIADISKRIRPKTHMLLDPAYGNGLRVVYKYSSKASTISSSLVSVEVSFENCSSEPISKL
FLTDEDSGMSSESLDQTSPTDESSLQSEKEVPTLVPMEEITVLEPGQTTNRIIQVRFHHH
LLPLKLVLWCNGKKNPVKLRPDIGYFIKPLPMDIDLFSHKESQLPGMFEYTRRCSFTDHL
TELTDDKDGDGSSIKDSFLVICESLASKMLSNANVYLVSVNMPVAANLNDASGLCLRFSS
EILSTSIPCLISVKLDGKCFEPLNASVKINCEETVFGLNLLNRIVNFLAEPAVTS
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atgttcacacagttcggctctaccgctgagaactttagcaaggcgtcaacaatggtgttt
cggatcggcacagacgctcacctctacgacgatcccgacgatgtcagtatttcacctctt
ctcgacagcaaattcgactctgagaaatgcgaagctctcaaacgattgctcgctctcatt
gcccaaggcttagatgtatcgaattattttcctcaggttgttaagaatgttgcatctcag
tcattggaggtcaagaagcttgtttacttatatttgctgcattatgctgaaaggcgtccg
aatgaagcattgttgtcaattaatattttccagagagacctgggggatccaaacccattg
gtgagggcctgggcactccgtactatggcgggaattcgcctgcatgttatatcgcctctt
gttttggtggcagtgagaaaatgtgctagagatccctccgtatatgtgagaaaatgtgct
gccaatgctctcccaaaggttcatgatttgcgtcttgaggaaaatgccacggcaattata
gagattattggaatactgctatatgacaattcccctggagtggttggagctgctgctgca
gcatttgcttctgtttgtccaaataatttgcctctaattggtagaaactatacaaggcta
tgtgagattcttcctgatgttgaggagtggggtcagatcattttgatagggatccttctc
cgttatgtcattgcaaggcaggggcttgcaaaagaatctattatgttatccttatgtcct
gaggatgtcagtcatgataaaagtggttcagactttgataccaactccttagaaatgaac
aaaacatacgaaatgagtagcgggattcaggagcatgagttggcagctatggtgtccagg
agttaccttgaaggaccagataagtacttgtcacattctactaatgcagatgtgatgtcg
tcagaattggattcgtcacgatttacatcatcaaaaagtgacgatgacatgaagatcctg
ctgcagtgtacttcacctttattatggagtcggaacagtgctgtggtgcttgctgctgct
ggagtacactggattatggcaccaaggaaggacattgcaaaaattgtcaagcctctattg
tttctcctgagatcatctgatgcctcaaaatatgtggtcctctgcaacattcaagtcttt
gctaaagtgatgccctctcttttcaccccacactatgaagatttctttatcaactcttca
gatgcatatcaagttaaagctctgaaacttgagattctttcttccattgctacagatgca
tcaatctcggttatttttcaagagttccaggattacgtcagtgatcccgacaggagattt
gctgcagatactgttgctgctattggtctgtgtgctaagcggaatccacaagtagcaaat
acttgcttggagggactgctggctcttacctcacccaaatccgtaaatagtacctctgga
tccacggatgatgaagcagttgtgttagttcaagcaattacatccatcaaagatataata
aaacaagatccatcaagtcatgataaggccattatctatttggctcaaaatttggatgca
atcaaggttcctgtggcccgtgcaatgattgtttggatagtaggtgaatacaactctatt
ggcaacatcataccaaaaatggtgtctgtaattctaagatatctagctcgaagctttcct
tctgagtccattgaaacaaaacatcaaattctgaatgctgctgttaaggtccttttaagt
tcaaagggggaagatttccacactgcaagaagcatactaagctacgtgctggagcttgcc
aagtttgatttgaactatgatgttcgtgaccgtgctcgtatcttaaggaaacttctgtca
tgcttctacgttagttctagtggactagaggaagaatccagtcagaaaagtgaaaataat
gaacttccacttttgcttgcagaacatgtatttggtgaaaaaataacatcttctgaaatg
gttaataaccggttctaccttccaggatccctctcacagatagttctccatgcagctcca
ggatatgaacctcttccggagccttgtagtttgactgaattggatattattgaaggaatg
aaaatatcagaggagggacccactcaagtgggctcgtatgaagtcgacaattctgacgta
gactcggggtctttgaatgaggaaggcagttacagttatgattcagaagattctatcact
agttcaaggggaactgataacaccaatgagggtgctgcaagggaagctgataacactgat
tcattaatcaacttttctgatgttggcaaagcacaaaaagagattgaagtctcagaggag
aacgattttcatggtgaattgatgtcgaaaggagctctggaatcatggttggatgataat
ccttcttcaagtcagaatgtacctgaaatggataacgaaaggtcatcgtcagcaaggatc
tcaattgcagatattagtaagagaattagacctaaaacgcatatgcttttagatccagca
tatggaaatggtttgagagtagtatataaatattcatcaaaggcttcaacaatatcatca
tcacttgtaagtgttgaagtttcttttgaaaactgttctagtgagccaatatcaaaatta
tttctgaccgatgaagattctggcatgagttctgaatcgttggaccaaacatcgcctact
gatgaaagttctttgcaatctgagaaggaagtacctaccctggtccccatggaagaaatt
actgtgcttgaaccaggtcagactacaaatagaataatccaagttcgctttcatcatcat
cttttacctttgaagcttgtcttatggtgcaatggcaagaaaaacccggttaagttgcgg
cctgacataggatatttcataaagcctctcccgatggacattgatcttttttcgcacaaa
gaatcccaactccctggaatgtttgaatatacaaggagatgttccttcaccgaccacctt
acagagctgactgatgacaaggatggcgatggctcatcgataaaggattcattcctggtt
atatgcgaaagtttggcatcaaagatgctaagcaatgcaaatgtttatcttgtatccgtg
aacatgccggtggctgcaaacctgaatgacgcttcaggtctgtgtttacgtttcagcagt
gagatccttagtacctcgattccatgccttatctctgttaagctcgatggtaaatgcttt
gaacccctaaatgcatctgtcaaaattaactgcgaagaaactgtgtttggtctgaatctg
ttgaatagaatcgtaaactttttagccgagcctgcggtgactagttag
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