Cynara cardunculus var. scolymus (artichoke): 112524568
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Entry
112524568 CDS
T05604
Name
(RefSeq) cation-chloride cotransporter 1-like isoform X1
KO
K14427
solute carrier family 12 (potassium/chloride transporter), member 4/6
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccav02000
]
112524568
Transporters [BR:
ccav02000
]
Solute carrier family (SLC)
SLC12: Electroneutral cation-coupled Cl cotransporter
112524568
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Gene cluster
GFIT
Motif
Pfam:
AA_permease
SLC12
AA_permease_2
Na_Ala_symp
Torsin
Motif
Other DBs
NCBI-GeneID:
112524568
NCBI-ProteinID:
XP_024990214
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Position
LG 13:complement(62072..78983)
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AA seq
979 aa
AA seq
DB search
MRNEEIESSDDNDLPSSAPRVGRKYGPVVAHDNDPVVLEMSSFDHGSSSNSLNKVKTTFQ
PNAGAGAREESIPNDRGVNGEHKESKLELFGFDSLVNILGLKSMTGEPIPVPTSPRGHED
SSIAAQHPTTSSVVKSGTLMGVFIPCLQNILGIIYYIRFSWIVGMAGIGGSLAVVALCGL
CTFLTAVSLSAIATNGAMKGGGPYYLIGRALGPEVGVSIGLCFFLGNAVAGSMYVLGAVE
TFLNAVPKAGLFRETITEVNGTAIAEPITSPSLHDLQVYGIIVTIILVFIVFGGVKMINK
VAPAFLIPVLFSLLCIFIGIFVAGKDRPAVGVTGLSLRSFKDNWSSDYQTTNNAGIPDPN
GEIYWHFNALVGIFFPAVTGIMAGSNRSASLKDTQRSIPIGTLAATLTTTALYFISAFLL
GSVATREKLFTDRLLTATIAWPSSAIIYIGIILSTLGAALQSLTGAPRLLAAIANDDILP
VLNYFKVADGSEPHIATFFTAFLCIACVLIGNLDLISPTITMFYLLCYAGVNLSCFLLDL
LDAPSWRPRWKFHHWSLSLLGASLCIVIMFLISWSFTVVSLALASLIYYYVSIKGKAGDW
GDGFKSAYFQLALRSLRSLGASNVHPKNWYPIPLIFCRPWGKLPENVPCHPKLADFANCM
KKKGRGMSIFVDILDGDYHDCAEDAKIACKNLATYIEYKRCEGVAEIVVAPTMSDGFRGI
VQTMGLGNLKPNIVVLRYPEIWRRENLTEIPATFVGIINDCIVANKAVVIVKGLDEWPNE
YQRQYGTIDLYWIVRDGGLMLLLSQLLLTKEMFESCKIQVFCIAEEDSDAEELKADVRKF
LYDLRMQAEVIVISMKSWDDKDTQDDSVEAFTAAQGRIKNYLSEMKERGEREGKPLMADG
KNVVVNEQQVDKFLYTTLKLNSTIMKYSRMAAVVLVSLPPPPVNHPSYFYMEYMDLLVEN
IPRLLMVRGYRKDVVTLFT
NT seq
2940 nt
NT seq
+upstream
nt +downstream
nt
atgaggaatgaagagattgagagctccgatgacaacgacttaccatcctccgctccacga
gtcggtcgtaaatacggccccgtcgttgcacacgacaatgatcccgtcgtgcttgagatg
tcctctttcgatcacggatcttcgtctaattctttaaacaaagtaaaaacaacttttcag
ccaaatgcgggtgcaggtgcaagagaagagtcgattccaaatgatcgaggtgtcaatggt
gaacacaaagaatccaaattggaactatttggttttgactctcttgttaacattcttggt
ctcaagagtatgacaggagagccgatccctgtacctacgagtcctagaggccatgaagat
agttctattgctgcacaacatccaacgactagcagtgttgtcaaatccgggacgttgatg
ggagtctttatcccatgcttgcagaacatattgggtattatctactacatcagattttcc
tggattgttggcatggctggcataggtgggtccctagcagtagttgcgttgtgtggattg
tgtactttcttgactgcagtatcattgagtgcaattgcaactaatggtgcaatgaagggc
ggggggccttactatctcattggtcgtgctttgggccctgaagttggagtcagcattgga
ctatgtttctttctagggaatgctgttgctggatctatgtatgtcttgggagcggtggag
acatttttgaatgctgtgccaaaggctggacttttcagagagactatcacagaagtaaat
ggcacagcaatagcggaacctataacaagtccaagtttgcatgacctgcaagtgtatggg
attatcgttactatcattttagtctttatagtttttggaggtgtaaaaatgatcaacaag
gttgcaccagcctttcttatacctgttctattttcgctgctctgcatattcattgggata
tttgtggcagggaaagatcgtccagcagttggagttactggcttgagtttgagatctttc
aaggacaattggagttctgattatcaaacaacaaacaatgctgggatacctgatcccaat
ggagagatatactggcattttaatgcattagtaggtattttcttccctgctgtaacggga
attatggctggttcaaatcgctctgcttcgttgaaagacactcagcgctctattcctatt
gggacattggccgcaacactaacaactactgccttgtacttcatttctgcgttcctttta
ggatctgtagctacaagggagaagctttttacagacagattactgactgcgaccattgca
tggccgtcgtcagcaatcatatacataggaatcattctttcaactttgggtgctgctcta
cagagtctgactggtgccccgcgtctgcttgcagcgatagccaatgatgacattctacct
gttcttaactacttcaaggttgcagatggcagtgaaccccatattgcaaccttcttcacg
gcattcctctgtattgcgtgtgtcctaattgggaatcttgatctcatctccccaaccata
accatgttttatctgctgtgttatgcgggtgtgaacttatcctgctttcttctggatctc
ttagatgctcctagctggcgtcctcggtggaaatttcatcattggagcctctctcttctt
ggagcatctctttgtattgtaatcatgtttttgatttcttggtcattcactgtggtgtcc
cttgctcttgctagcctcatatactattatgtgagcatcaagggaaaagccggggactgg
ggagatggtttcaagagtgcatattttcaacttgctcttcgcagtcttcgatctttggga
gctagcaatgttcatccaaagaactggtatccgatccccctcattttctgccggccatgg
ggcaagttaccagagaacgtaccctgtcatccaaaacttgctgattttgcgaattgcatg
aagaaaaagggcaggggtatgtccatatttgtggacatcctagatggagactaccatgat
tgtgcagaggatgccaaaattgcttgcaagaatcttgctacgtacatcgagtacaagcgc
tgtgaaggggtggctgagatagtagtggccccaaccatgtctgatggtttccgaggtatt
gtccaaacaatgggacttggtaatctgaagcccaatattgtggtgttgcgttaccctgag
atatggcggcgtgaaaacttgacagaaatcccagccacttttgtggggataatcaatgac
tgtattgttgctaacaaagcagttgttattgtgaaggggctggatgaatggccgaatgag
tatcagagacagtatgggaccattgacttgtactggattgttagagatggtggtctgatg
ctgcttctatctcagctcctgcttacaaaggagatgtttgaaagctgtaagattcaggtg
ttctgtattgcagaggaggattctgatgcagaggagctaaaggctgatgtaaggaaattc
ctttatgatcttcggatgcaagcggaagtgattgtgatttcgatgaagtcgtgggatgac
aaggacacgcaagatgactctgtggaggcgttcactgcagctcaagggcggatcaagaat
tacttgtcggaaatgaaggagagaggggaaagggaggggaaaccgctaatggcagatgga
aagaatgtggtggtgaatgaacaacaagtggacaaattcctgtatacaactcttaagttg
aactcgacgattatgaagtattcaaggatggcagcggtggtgctggtgagcctcccacct
ccgccggtgaaccatccatcgtatttttacatggaatatatggacttattggtggagaac
attccaaggctgctaatggttagaggttatcggaaagatgttgtgacgctgttcacgtag
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