Cynara cardunculus var. scolymus (artichoke): 112524603
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Entry
112524603 CDS
T05604
Name
(RefSeq) ras-related protein RABF1
KO
K07889
Ras-related protein Rab-5C
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04144
Endocytosis
ccav04145
Phagosome
ccav04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112524603
04145 Phagosome
112524603
04148 Efferocytosis
112524603
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccav04131
]
112524603
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccav04147
]
112524603
04031 GTP-binding proteins [BR:
ccav04031
]
112524603
Membrane trafficking [BR:
ccav04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
112524603
Endosome - Lysosome transport
112524603
Exosome [BR:
ccav04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
112524603
Exosomal proteins of other body fluids (saliva and urine)
112524603
Exosomal proteins of colorectal cancer cells
112524603
Exosomal proteins of bladder cancer cells
112524603
GTP-binding proteins [BR:
ccav04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
112524603
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
RsgA_GTPase
Gtr1_RagA
GTP_EFTU
MMR_HSR1
AAA_7
AAA_16
Motif
Other DBs
NCBI-GeneID:
112524603
NCBI-ProteinID:
XP_024990271
LinkDB
All DBs
Position
LG 13:complement(10158154..10165165)
Genome browser
AA seq
200 aa
AA seq
DB search
MGCSSSLPDRSAGRAGGLNPDNGGDSDAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPT
SKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVGVIVYDITNPDS
FSKAQYWVKELQKHGSPDIVLALVGNKADLQDKREVSVQDGMDYAEKNGMFFIETSAKTA
DNINQLFEEIAKRLPRPSPS
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atgggttgctcctcctcccttccagataggagtgcggggcgggcgggtggacttaatccg
gataacggcggcgattctgatgccaaaaatctacgtgttaagctggtgctattaggggac
tctggtgttgggaaaagctgcattgttcttcgctttgtccgtggtcagtttgatccaact
tccaaggtgactgttggagcttcattcttgtcacagacaatagctctgcaggactccacg
acagttaaatttgaaatttgggatactgctggccaggagagatatgcagcactagcccca
ctttattacagaggtgcggcagttggagttattgtgtatgatataactaatcccgactca
ttcagtaaagctcaatattgggtcaaggagctacagaagcacgggagccctgatatcgtc
ttggctttagttggtaacaaagccgatcttcaagataaacgagaggtgtctgttcaagat
ggaatggactatgcagaaaagaacggtatgttcttcattgaaacttctgccaagacagct
gataacatcaatcagctatttgaggaaatcgcaaagagattgcctcgaccttctccatca
tga
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