KEGG   Cynara cardunculus var. scolymus (artichoke): 112524603
Entry
112524603         CDS       T05604                                 
Name
(RefSeq) ras-related protein RABF1
  KO
K07889  Ras-related protein Rab-5C
Organism
ccav  Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04144  Endocytosis
ccav04145  Phagosome
ccav04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:ccav00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    112524603
   04145 Phagosome
    112524603
   04148 Efferocytosis
    112524603
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ccav04131]
    112524603
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ccav04147]
    112524603
   04031 GTP-binding proteins [BR:ccav04031]
    112524603
Membrane trafficking [BR:ccav04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    112524603
 Endosome - Lysosome transport
    112524603
Exosome [BR:ccav04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   112524603
  Exosomal proteins of other body fluids (saliva and urine)
   112524603
  Exosomal proteins of colorectal cancer cells
   112524603
  Exosomal proteins of bladder cancer cells
   112524603
GTP-binding proteins [BR:ccav04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    112524603
SSDB
Motif
Pfam: Ras Roc Arf RsgA_GTPase Gtr1_RagA GTP_EFTU MMR_HSR1 AAA_7 AAA_16
Other DBs
NCBI-GeneID: 112524603
NCBI-ProteinID: XP_024990271
LinkDB
Position
LG 13:complement(10158154..10165165)
AA seq 200 aa
MGCSSSLPDRSAGRAGGLNPDNGGDSDAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPT
SKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVGVIVYDITNPDS
FSKAQYWVKELQKHGSPDIVLALVGNKADLQDKREVSVQDGMDYAEKNGMFFIETSAKTA
DNINQLFEEIAKRLPRPSPS
NT seq 603 nt   +upstreamnt  +downstreamnt
atgggttgctcctcctcccttccagataggagtgcggggcgggcgggtggacttaatccg
gataacggcggcgattctgatgccaaaaatctacgtgttaagctggtgctattaggggac
tctggtgttgggaaaagctgcattgttcttcgctttgtccgtggtcagtttgatccaact
tccaaggtgactgttggagcttcattcttgtcacagacaatagctctgcaggactccacg
acagttaaatttgaaatttgggatactgctggccaggagagatatgcagcactagcccca
ctttattacagaggtgcggcagttggagttattgtgtatgatataactaatcccgactca
ttcagtaaagctcaatattgggtcaaggagctacagaagcacgggagccctgatatcgtc
ttggctttagttggtaacaaagccgatcttcaagataaacgagaggtgtctgttcaagat
ggaatggactatgcagaaaagaacggtatgttcttcattgaaacttctgccaagacagct
gataacatcaatcagctatttgaggaaatcgcaaagagattgcctcgaccttctccatca
tga

DBGET integrated database retrieval system