Cynara cardunculus var. scolymus (artichoke): 112524802
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Entry
112524802 CDS
T05604
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 7-like
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccav03009
]
112524802
03036 Chromosome and associated proteins [BR:
ccav03036
]
112524802
Enzymes [BR:
ccav01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
112524802
Ribosome biogenesis [BR:
ccav03009
]
Eukaryotic type
Pre-60S particles
Helicases
112524802
Chromosome and associated proteins [BR:
ccav03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
112524802
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
DD_DDX21-DDX50
ResIII
FlpD
Motif
Other DBs
NCBI-GeneID:
112524802
NCBI-ProteinID:
XP_024990521
LinkDB
All DBs
Position
LG_13
Genome browser
AA seq
667 aa
AA seq
DB search
MVLPYHHEGGEKKQEDAGKPEDAAAVMEMRKRTPILPHNQVDESMKKIRKKKMKTFGMDE
DEDVGRDKNPNAVSNFRISEPLRIALKTKGIEALFPIQARTFESIYDGLDLIGKAKTGQG
KTLAFILPILESLINGPEKASRRTGYGRAPTILVLLPTRELAKQVFTDFKYYGDAVGLTS
CCLYGGGGASISPQTVQLKRGVDIVVGAVGRVKDHIERGNLDFSSLKYRILDEADEMLRQ
GFVEDVEYILGKVNDASKVQTVLFSATLPAWVNHIASQFLKVNKKTVDLVGVEVMKASEN
VRHIIMPCSSSARCQVIPDIIRHHSSGGRTIVFTETKDYCSELAGVLPGARPLHGDIQQS
QREATLGGFRSGKFMTLVATNVAARGLDIHDVQLIIQCEPPRDVEDYIHRSGRTGRAGNS
GIAITLYEPRRANISKLEREAGVKFEHVSAPQPSDIAKAAGADAAEAILQVSDSVIPVFK
SAAEDLLNTSGLSPVELLAKALAKSIGYTEIKQRSLLTSMENYVTVLLEAGRPIYTPSFA
YGVLRRILPEEKVESVRGLALTADQKSAVFDVSVDDLNTFLAGQENAGGVSLVVVNALPQ
LQEREQSRGRFGDGRGGYGNRRGGSGGGGGGGGFSRGGRVGYSDRRNDRFPRGSGGGGRG
RGGYKKW
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggtgctaccatatcatcatgaaggtggtgagaagaagcaagaagacgccggaaaacca
gaggatgcggcggcggtgatggagatgaggaagagaaccccaattctaccccacaaccaa
gttgacgagtcgatgaagaagattaggaagaagaaaatgaagacatttgggatggatgaa
gatgaggacgttggtagagacaagaatcccaatgcggtttcaaatttcaggatttcagag
cccttgaggattgcattgaagacgaaggggatcgaggcgttgtttcctattcaagctcgg
acgtttgaatccatctacgatggtcttgatttaatcgggaaggctaaaacgggtcagggt
aaaacattggccttcattttgccgatattggagtccctaataaatggaccagagaaagca
tcacggaggactggatatggtagagcaccaacgattcttgtgcttctacctactagggaa
ttagcaaagcaggtattcaccgactttaaatactatggtgatgctgtgggtctgacgtca
tgttgtttgtatggtggaggaggagcgtctatttctcctcaaactgtgcaattgaaaaga
ggggtggatatagttgtgggcgcagttggccgtgttaaggatcacatagagaggggaaat
cttgatttcagttcattgaaataccgcatccttgatgaagctgatgaaatgttgaggcag
ggttttgtcgaagatgttgagtatatcttaggcaaggtgaatgatgcaagcaaagttcaa
accgttcttttcagtgcaactttgccagcttgggtaaatcatattgcttcacagtttctg
aaagtgaacaagaagactgtggatcttgttggtgtggaggtaatgaaggctagtgaaaac
gtgaggcacattatcatgccttgctctagttcagccagatgccaggtcattcctgatatt
attcgccatcatagcagtggaggacgcaccattgttttcacggagacaaaagattattgt
tccgaacttgctggtgtgttgcctggagcccgtcctttgcatggggacatacaacagtct
caacgtgaggcaacacttgggggtttccgatcaggaaagttcatgacactagttgcaaca
aatgtggcggcacgaggacttgacattcacgatgttcagttgattatccagtgcgaacca
ccacgagacgttgaagactatatacatcgatctggaagaacaggaagagcaggaaattct
ggtattgccatcacactttatgagccaaggagggcaaatatttccaagttagagagagaa
gctggtgtgaaattcgaacacgtctctgctcctcagccatcagatattgctaaagctgct
ggtgcagatgctgcagaagcaatacttcaagtatccgatagtgtgatacccgtcttcaag
tcggctgccgaagatctcttgaatacttccggtctctcgccagtagaactgctggcaaag
gcgcttgccaagagcattggttataccgagattaagcagagatcgttgctaacttccatg
gaaaactacgtgacagttcttcttgaggctggaagacccatatacacgccttctttcgca
tatggtgtcttgaggaggattttacccgaagaaaaggtggagtccgttagaggtcttgca
ttgactgctgaccaaaaaagtgcagttttcgatgtttctgttgatgatctcaacaccttc
ctcgccggccaagagaatgctggtggtgtaagcttggtggtggtaaatgcattgccgcaa
ttgcaagagagagaacagtcaaggggaagattcggtgacggccgtggtggatacggtaac
agaagaggtggcagcggcggcggcggcggcggtggtgggttctctcgaggaggacgagtt
ggttactccgatcgccggaatgatagatttcccagaggttctggtggaggaggcagaggc
cgaggagggtataaaaaatggtga
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