Cynara cardunculus var. scolymus (artichoke): 112525006
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Entry
112525006 CDS
T05604
Name
(RefSeq) glutamate receptor 3.3 isoform X1
KO
K05387
glutamate receptor, ionotropic, plant
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ccav04040
]
112525006
Ion channels [BR:
ccav04040
]
Ligand-gated channels
Glutamate (ionotropic)
112525006
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GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Peripla_BP_6
SBP_bac_3
Lig_chan-Glu_bd
DUF2371
Motif
Other DBs
NCBI-GeneID:
112525006
NCBI-ProteinID:
XP_024990721
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All DBs
Position
LG 1:49380494..49386811
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AA seq
918 aa
AA seq
DB search
MGVHKWSLVALVLLNLGVFLINGLSTHNASTRPAIVNIGAIFTFDSTIGKVAKVAIEEAV
KDINANSTVLRGTKLRLEMRSSNCSGFLGMVGALQFMESDTIAIIGPQSSVVAHIISHVA
NELQVPLLSFAATDPTLSNLQFPYFVRTTQSDLYQMNAVAEIIDYYNWRDVIAIFIDDDY
GRNGVLALDDALAAKRCKISYKVGIPPGPGFGRTEVMDILVKVALLESRVIVLHVYPDMG
YLMFSVARYLGMMADGYVWIATDWLSSSLDSSLPLPLEKMENMQGVVALRQHTPDSVEKK
AFTSKWSKLTGGSFGLNSYALYAYDTVWIIAHAIDAFFDQGGIVSFSNDSRLSSGGFADL
HLDAMSIFNGGKLLLDNMWKSDFVGLTGHIKFDSDRNLVNPAYDIINIIGTGIRTVGYWS
NGSGLSTLTPENLYSKQVNRSSANQELHSIIWPGEVVTKPRGWVFPNNGKLLKIAVPLRV
SYKEFVSQLPGTNMSKGFCIDVFVAAVNLLPYAVPYQFIPFGNGKENPSYTELVRLISTG
VFDGAVGDIAIVTNRTKIVDFTQPYAASGLVVVAPFKKMNTGAWAFLRPFSPTLWAVTAA
FFLVVGIVVWILEHRINDDFRGTPKRQVITILWFSLSTLFFAHRENTASTLGRIVLLIWL
FVVLIINSSYTASLTSILTVQQLSSPVKGINSLKKTNDRIGYQVGSFAERYLLEIGIPQS
RLVALGTPDAYTDALRKGSKNGGVAAIVDERPYIELFLSNQCTFRVVGTEFTKSGWGFAF
PRDSPLSVDLSTAILTLSENGDLQRIHDKWLIRSGCSTDNSELESDRLHLKSFWGLFLIC
GVACFIAIFIYFCQVFRRFRNVARSTVDSDGSRSRRLQTLLSIIDEKKDPRDKKRQKVER
SISDESKDCETGHDSEQR
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atgggtgttcataaatggagtcttgttgctttagtgttactaaatttgggggtttttctg
ataaatggtttgagcacacacaatgcatctacaagaccggccattgtgaatattggagct
attttcacttttgattcaacaattggcaaagttgcgaaggttgcaatcgaggaggctgtc
aaagacatcaatgccaattcaaccgttcttcgtgggacaaaacttagattggaaatgcgg
agttcgaattgtagcgggtttcttggcatggttggagcgttacagtttatggaaagcgac
acgattgcgattataggtccacaatcttcggtagtagcccacattatatctcacgtagca
aacgaacttcaagttccgctcttatcattcgctgccacggaccccaccctatcgaacctc
cagttcccgtattttgtgagaacaacgcagagtgatttgtaccagatgaatgctgttgcg
gaaatcatagactattataattggcgggacgttattgcaatctttatagacgatgattat
ggaagaaacggagtgttagcactagatgatgcattagcggcaaagcgttgcaaaatatcg
tataaggttggaatcccacctggacctggatttgggcggactgaagttatggatattctt
gtgaaggttgcgttattggaatctcgagtgattgttcttcatgtttatcccgatatgggg
tacttgatgttctcagttgctcgttatcttgggatgatggcagatgggtatgtttggatt
gctacagattggctttcgtcttctttagattcgagtttgccacttcctttggaaaaaatg
gagaatatgcaaggggttgttgctttgcggcaacacacaccggattccgttgaaaagaaa
gcgtttacgtcaaaatggagtaaattaaccggtggttcttttgggctaaattcttacgct
ttatatgcttatgataccgtttggattatagctcatgctattgatgcgttctttgatcaa
ggcgggattgtttcgttttcgaatgattcaagattgagctccggtggttttgcggatctt
catcttgatgcgatgagcatctttaatggcggaaaactcttgttggataatatgtggaag
agtgatttcgttggtttaacagggcatataaagttcgattccgatagaaatcttgttaat
cccgcatatgatattattaacataatcggaaccggaattcgaactgttggatactggtca
aacggttcaggtttgtcgactttgacccccgagaatctttactcgaaacaagttaatcga
tcaagtgcgaatcaagaacttcatagcataatttggccgggagaggttgtgacgaagcca
cggggatgggtttttccgaataatgggaagttgctgaaaattgcggtgcctcttcgggtg
agttataaggaatttgtttcacaattgccgggaactaacatgtcaaaagggttttgtatc
gacgtttttgttgcggccgtgaatttgctcccgtatgcggtgccgtatcaattcatacca
ttcggaaacggcaaagaaaacccgagctacaccgagctcgtaagattgatttcaaccggg
gtttttgatggtgcggttggcgacatcgctattgtcacgaaccgaacaaaaattgttgat
ttcacgcaaccttatgccgcatcagggcttgttgtcgtggccccgtttaagaaaatgaac
acaggtgcttgggcatttctacgcccgttttctccaacgttgtgggcggtgactgcggct
ttctttcttgtcgtcggcattgtggtgtggattctagagcaccgaataaacgacgacttt
agggggactcccaaacgacaagtcataacgatcctatggttcagcctttctactctcttt
tttgcacatagagagaacactgcaagtactctcgggcgtatagtgttactcatttggctt
tttgtagttctaatcattaactcgagttataccgcaagtttgacttcgattcttacggtc
caacaactatcttctccagtcaaagggataaattcgttgaaaaaaaccaacgatcggatt
ggataccaagtgggatcttttgcggaacgatatttgctcgaaatcgggattccccaatcc
cgacttgtggctcttggaacacccgatgcttatactgatgcactccgaaaaggctccaag
aacggtggagttgcggccatagttgacgaacgtccgtatatcgagcttttcttgtcgaac
cagtgcacgtttcgggttgttgggaccgagttcaccaagagtggctggggttttgcattc
ccgcgtgactctccgttgtcggtcgacttatcgaccgcaatccttacgctatcagaaaac
ggcgatctccaacggatccacgacaaatggctaatacgaagcggatgcagcaccgataat
tctgagctcgagtcggaccgattacacctcaaaagtttctggggtctcttccttatatgc
ggtgtcgcgtgtttcatcgccattttcatatacttctgtcaggtatttcgacggtttcgt
aacgtcgctcgatcgacagtcgactctgacgggtcccgatcccgacgacttcaaacactc
ctttcgatcattgacgagaagaaagatcctcgagataagaaaaggcaaaaagtggaaagg
tcgatttcggatgagagtaaagattgtgagaccggacacgattcagaacaaaggtag
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