KEGG   Cynara cardunculus var. scolymus (artichoke): 112525044
Entry
112525044         CDS       T05604                                 
Name
(RefSeq) squalene synthase-like
  KO
K00801  farnesyl-diphosphate farnesyltransferase [EC:2.5.1.21]
Organism
ccav  Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav00100  Steroid biosynthesis
ccav00909  Sesquiterpenoid and triterpenoid biosynthesis
ccav01100  Metabolic pathways
ccav01110  Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:ccav00001]
 09100 Metabolism
  09103 Lipid metabolism
   00100 Steroid biosynthesis
    112525044
  09109 Metabolism of terpenoids and polyketides
   00909 Sesquiterpenoid and triterpenoid biosynthesis
    112525044
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01006 Prenyltransferases [BR:ccav01006]
    112525044
Enzymes [BR:ccav01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.21  squalene synthase
     112525044
Prenyltransferases [BR:ccav01006]
 Terpene biosynthesis
  Squalene/phytoene synthase
   112525044
SSDB
Motif
Pfam: SQS_PSY
Other DBs
NCBI-GeneID: 112525044
NCBI-ProteinID: XP_024990753
LinkDB
Position
LG 13:39631430..39638895
AA seq 421 aa
MGSLQGLQAMLKHPDDIYPLLKLKMAAKQAEKQIPTSPHWGFCYTMLHKVSRSFALVIQQ
LGSELRDAVCIFYLVLRALDTVEDDTSIDTMVKIPILMEFHSHIYDPDWHFACGTKEYKI
LMDQFHHVSTAFLELNGSYQEAIEDITMKMGAGMAKFICKEVETVDDYEEYCHYVAGHVG
LGLSKLFHASGKETLLPDSISNSMGIFLQKTNIIRDYLEDINEIPKARMYWPQEIWGKYV
NKLEDLKYEKNSEKAVQCLNDMVTNALAHIEDSLKYLSELHDPAIFKFCAIPQIMAIGTL
SLCYNNIEVFRGVVKLRRGLTAKIIDRTKTMADVYSAFYDFCSLLKIKVDLKDPNAHVTI
TSIESAQKICRESGTLDKRKSYIADDLPNYGPAMIAILVVILAILYAYLSANRSSKAKVT
L
NT seq 1266 nt   +upstreamnt  +downstreamnt
atggggagtttacaaggtttacaggcgatgttaaagcatccggatgatatttatccattg
ttgaagctcaagatggcggccaagcaggcggagaaacagatcccgacgtcgccacactgg
ggattctgttatacaatgcttcataaagtttctagaagtttcgctctcgttatccaacag
cttggctcagagcttcgtgacgctgtatgcattttttatttggttcttcgagctcttgac
actgtcgaggatgatacaagcatagatactatggttaagataccaattttgatggaattc
catagccatatctatgatcctgactggcatttcgcatgcggtacaaaggaatacaaaatt
ctgatggatcagttccatcatgtttctactgcctttttggagcttaatggaagttatcag
gaggcaattgaggatattaccatgaaaatgggtgcaggaatggcaaaatttatatgcaaa
gaggttgagacagttgatgactatgaagagtattgccattatgttgcgggacatgttgga
ttaggactgtcgaaactctttcatgcctccggtaaagaaactttgcttcctgattccatc
tccaattcaatgggcatatttctccagaaaacaaacatcattagagattatcttgaggac
ataaatgaaatacccaaggcacgtatgtattggcctcaagagatttggggtaaatatgtg
aataaactagaggacttgaaatatgaaaagaactcagagaaggctgttcagtgcctgaat
gatatggtgacaaatgctttagcgcatatcgaagattctttaaagtatttgtccgaatta
catgatccagcaatcttcaagttttgtgctataccacagatcatggcaattggaacacta
tctttatgctacaacaacattgaagtttttagaggtgtagtgaaattgagacgtggtctt
actgcaaaaataatcgatcggactaaaaccatggcagatgtctatagtgctttttatgat
ttttgctcattgctcaaaatcaaggttgatttgaaggacccaaatgctcatgtaacaatc
accagcatagaatctgcccaaaaaatttgcagggaatccggcaccctcgacaaaaggaaa
tcgtacatagccgacgacttgccaaactacggtccagctatgattgctattcttgtcgtt
atattggcaattctttacgcatatctatctgctaatcgatccagcaaagcaaaagttaca
ttgtga

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