Cynara cardunculus var. scolymus (artichoke): 112525108
Help
Entry
112525108 CDS
T05604
Name
(RefSeq) calmodulin-binding transcription activator 4 isoform X1
KO
K21596
calmodulin-binding transcription activator
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccav03000
]
112525108
Transcription factors [BR:
ccav03000
]
Eukaryotic type
Other transcription factors
Others
112525108
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CG-1
Ank_2
IQ
Ank
Ank_4
TIG
Ank_3
MMS22L_C
Motif
Other DBs
NCBI-GeneID:
112525108
NCBI-ProteinID:
XP_024990835
LinkDB
All DBs
Position
LG 13:175788..185187
Genome browser
AA seq
969 aa
AA seq
DB search
MMTSGYNIMDLIREAHIRWLKPGEVLFILQHFEESQLTHEPPQKPPSGSLFLFNKRVLRF
FRKDGHSWRRKKDGRNVGEAHERLKVGNVEALNCYYAHGEVNPNFQRRSYWMLDPSMDHI
VLVHYRDITMGGHSAGPISTVSTGSSTLIQSSNSYVTQFTQSAAAFSQFREPYESTSSPG
SVEVSSDVVIKSNGTSPLTLAEVTEEIGGSPNFEIDQALQRIREQLSLDEDNLKDIGAFY
SENEISNESGITVNEQDYGGSGGMHDGSINYTSEQYPGEYGTAHQYQQQSEGEFSITSQQ
TSIWDDVLIYNGNAVGDGSQKNFVYPSDRNGVLLPQPRRDPVEEQEKYNYGYTSANNDSS
ILLPHELEDFKFPAYTPARNLSDSYPDFYSTMFGQGQGGMPLESASSLTIAQEQKFTIRE
IAPQWGYASEPTKVLVIGTFTCDLAKREWYCMFGDTEVPVEIIQEGVLCCYAPPCLPGKV
SLCITSGNRESCSEIREFEYCDKPSSYIHTNQTDKKFSRSSEESLLLVRFVQMLLSDQVR
HKEGKTRIDLLVSSMASEDSWSQVIEALLDGSLASSNTTDWLLEELLKDKLQQWLSSRLQ
DESAVPALSKREQGIIHMVSGLGFGWALTPILNSGVGVNFRDINGWTALHWAARFGREKM
VAELLASGASAGAVTDPSQLDPTGKTPASIAATCGHKGLAGYLSEVSLTSHPTLKLQQSE
LSRNSADLEAERTVDSISKLNLVSDEDPSLRDTLAAVRNTAQAAARIQSAFRAHSFRKRQ
QKESTRYATGDEYGILPSDIEGLSAASKLTFRNGNDHNAALSIQKKYRGWKGRKDFLALR
QKVVKIQAHVRGHQVRKNYKVFCWAVGVVEKVVLRWRRKGVGLRGFKQELGTLDDGEDED
IVKVFRKQNVDVSIDEAVSRVLSMVDSQQARQQYRRMLQKYRQAKAEHERLESEAASTSE
NEELNKFIM
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atgatgacgtcagggtataacatcatggatctcattcgagaagcacacatccggtggtta
aagccaggggaggtgctcttcatacttcagcattttgaggaaagccagcttacccatgag
ccccctcaaaagccacccagcgggtctttgtttctctttaacaagagggtccttcggttt
ttccgtaaagacggtcatagttggcggagaaaaaaggatggaagaaatgttggggaagcg
catgaacggctaaaggttggaaatgttgaagctctaaattgttattatgcacatggtgag
gtgaatccaaacttccagaggcgtagttattggatgttggatccgtcaatggatcacatt
gtacttgttcattacagagatataaccatgggtgggcatagtgctggacccatttcaaca
gtgtccacaggatcttctactcttattcagagttccaactcctatgttactcagtttact
caatctgctgctgcttttagtcaatttcgtgaaccttatgaaagcacctctagtcccggt
tctgtagaagttagttcggatgtagttattaaatccaatgggacaagtcccttgacttta
gcagaagtaactgaggaaattggcggttcacccaactttgaaattgatcaggctttgcaa
aggataagggagcagttgagtttggatgaggacaacttgaaagacatcggtgcattctat
agtgaaaatgagatttcaaatgaatcagggattacagttaatgagcaagattatggtgga
tctggagggatgcatgatggttcaatcaattacacatctgaacaatatccaggtgagtat
ggaacagcacatcagtaccagcaacaatcagagggtgaattttctattacaagtcaacaa
acttcaatttgggacgatgtactaatatataatgggaatgcagtaggtgatggttcacaa
aagaattttgtgtacccttcagacagaaatggagtactgctacctcaaccaagaagagat
ccagtggaagagcaagagaagtacaattatggatatacaagtgcaaataatgactcatcc
atattgttgcctcatgaacttgaagatttcaaatttcctgcatatacccctgcaagaaat
ttgtccgacagttacccggacttctactccacgatgtttgggcaaggacagggtggaatg
cctctcgaatcagcttcaagtctaaccattgcgcaagagcagaaatttactattcgtgag
atagcccctcaatggggctatgcatctgagccaacaaaggtactggttattgggactttc
acatgtgatctagccaaaagagaatggtactgtatgtttggtgacacagaagttcctgtt
gagattattcaagaaggagtcctctgttgttatgctcctccttgcttgcctggaaaagtt
agtctttgtattacctctggcaatcgagaatcttgtagtgagatcagggagtttgaatac
tgtgacaaaccaagcagttatatacatactaatcaaacagataaaaaattcagtaggagt
tctgaagaatcattgttacttgtcagatttgttcagatgctactatctgatcaagttagg
cataaagaaggaaagaccagaattgatcttctggtcagttcaatggctagcgaagactca
tggtctcaagtcattgaggctcttttagatggaagtttggcatcatctaacacaacagat
tggctcctggaagaacttctaaaagacaagttgcaacaatggctttcttctagattgcag
gatgagagtgctgttccagctttgtccaaaagagaacaagggataatacacatggtttct
gggttgggatttggatgggccttgaccccaattcttaactcgggagttggcgtaaacttt
cgtgacattaatggctggactgcgcttcactgggctgctagatttggaagggaaaaaatg
gtagctgaactcctggcttctggtgcttctgctggagcagttaccgatccaagtcaacta
gacccaactgggaaaaccccagcttctatagctgccacatgtggacacaaggggctcgca
ggttatctctcagaggtgtcactaaccagccatccaaccctcaagctgcaacaaagtgaa
ctttctagaaattcagctgacctcgaagcagaaagaaccgtagatagtatctcaaaacta
aatcttgtttcagacgaggatccttctcttagggacaccttagctgctgttaggaataca
gcacaggctgctgcacgcatacaatctgctttcagggcacattctttcaggaagaggcaa
caaaaagaatccaccagatatgctactggagacgaatatggcattcttccaagtgacatc
gagggactttcagcagcatcaaagttgacttttcggaatggaaacgatcataatgctgct
ttatctatccagaagaaatatcgaggctggaaaggccgcaaagactttcttgcacttcgc
cagaaagtagtgaaaattcaggctcatgtaagaggtcatcaggtacggaaaaactataag
gttttctgttgggctgttggtgtagttgagaaagttgtgctgaggtggcgtaggaaggga
gtgggcttgcggggattcaagcaagaactgggaacccttgatgacggtgaagatgaagac
attgtgaaggtatttcggaaacagaacgtggatgtttctattgatgaagccgtctcgagg
gtgctctccatggtggactctcaacaagcacgtcagcagtatcgccgcatgcttcaaaaa
tatcggcaagccaaggctgaacacgaacgtttagagagcgaagcagcctcaacttccgaa
aatgaggagttaaataagttcattatgtag
DBGET
integrated database retrieval system
