Cynara cardunculus var. scolymus (artichoke): 112525127
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Entry
112525127 CDS
T05604
Name
(RefSeq) general transcription factor 3C polypeptide 5-like
KO
K15202
general transcription factor 3C polypeptide 5 (transcription factor C subunit 1)
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccav03021
]
112525127
Transcription machinery [BR:
ccav03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
112525127
TFIIIC, fungi type
112525127
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Gene cluster
GFIT
Motif
Pfam:
Tau95_N
Tau95
Roughex
DUF3295
Motif
Other DBs
NCBI-GeneID:
112525127
NCBI-ProteinID:
XP_024990862
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Position
LG 13:38167528..38175974
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AA seq
569 aa
AA seq
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MGVIKDGTIAGVLPNNKLFAVNYPGYPSSMERALVTLGGAEGIAKVRQSPSNNLELHFRP
EDPYSHPVIGERFPCNNFLLKISKHNTKGSQSETDSSAHLKEDEALSQGSEDKIYANIIG
CVPEAYYFNGMVDYQHVLAVHADIVQRKKRNWADVEPQFEKRGLIDADQEDLMILLPPLF
SVKNIPENVVLKPSIDSSTKKKQEGAMQYPEMEIERSLGIDFRIKDVPKKVKWEMFIQEG
TDDWNYQMAVCELFDERPIWIKQSLSEHLSDKGLKIGDNTMKMLLFVAAYYFSNGPFLKF
YIRRGYDPRKDSESRIYQRIDFRVPPALRSYCDKGIASGSKHKWEDLCAFRVFPYKCQTS
FQLYELADDDIQQEIRKPSTQPTCTLATGWFPTHVLDILRLSVSLRFLSVYPDPGAESLL
KSASLRLGKLKRTKPVIKEQTVNEEEHQQLNRENVITEEKEMSSDEDDDGVDDDDDDDDV
EDDMEDENADEDFDAYAGLDMAGDGTDFLPESSYANQENISKSYLQELFGSFPYNGGSNN
EFQDAENSDGEYQIYDQHSDDENYSNDDN
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgggggtgataaaagatgggactattgcgggagttttaccaaataacaagctctttgca
gttaactatcctggttacccttcgtctatggaacgtgccctggtgactcttggcggagct
gaaggaattgccaaggttcgccagtcgccatcaaacaatttagaacttcatttccgccca
gaagatccatactcacatcctgtaatcggagagcgtttcccttgtaacaactttctattg
aagatatcaaaacataatacgaagggaagtcaatctgaaaccgattcaagtgctcatttg
aaggaagatgaggctctatcacaaggatcagaagataagatttatgccaatataattggt
tgtgtgccggaagcatattactttaatggaatggtagattaccagcacgttcttgctgtt
catgctgacattgtgcaaagaaagaagagaaattgggctgatgtggaaccacaatttgag
aaacgtggtcttatcgacgccgatcaagaggatttgatgattttattgccccctcttttc
tcagtgaaaaatataccagagaatgtggtgttgaaaccatctattgattccagcacgaaa
aagaaacaagagggagctatgcaataccccgagatggaaatagagcgaagccttggaatt
gatttccgcatcaaagatgttcctaagaaagtaaagtgggaaatgttcatacaagaaggt
acagatgattggaattaccaaatggccgtatgtgagttgtttgatgagcggcccatatgg
atcaaacaatctttgtctgagcatttgtctgacaaaggtcttaaaatcggcgacaacact
atgaaaatgcttctgttcgtggctgcttattatttttcaaatgggccgtttcttaagttt
tatatcagaagaggatatgatccacggaaagattcagagtctcgcatatatcagaggatc
gacttcagagtaccaccagccttgcgatcctattgtgataagggcatagcatctgggtcg
aagcataaatgggaagatttatgcgcgtttcgagttttcccttacaaatgtcaaacatca
tttcagctttacgaacttgctgatgacgacattcaacaagagattagaaagccttcgact
caaccaacctgcactttggcgacaggttggttcccaacacacgtccttgatatcttgagg
ttatctgtttccttgaggttcctatccgtatatccagatcctggtgcagagagccttttg
aaatcagcttctttacgtcttggaaagttgaaaagaacaaaaccggtgataaaagaacaa
acagttaacgaagaggagcatcaacaactaaatagagagaatgtaattaccgaagaaaag
gaaatgagcagcgatgaggatgatgatggcgttgatgatgatgatgatgatgatgatgta
gaagatgatatggaggatgagaatgcagatgaagattttgacgcatatgcaggattagat
atggctggtgatgggactgatttcttaccagaatcatcttatgcaaaccaagagaacatt
tcaaagagttacttgcaagaactctttggtagttttccatacaacggaggcagcaacaac
gagttccaagatgctgaaaacagtgacggagaatatcagatatacgatcaacacagtgat
gacgaaaactactccaatgacgataactaa
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