Cynara cardunculus var. scolymus (artichoke): 112525250
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Entry
112525250 CDS
T05604
Name
(RefSeq) ABC transporter B family member 15-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
112525250
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccav02000
]
112525250
04147 Exosome [BR:
ccav04147
]
112525250
04090 CD molecules [BR:
ccav04090
]
112525250
Enzymes [BR:
ccav01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
112525250
Transporters [BR:
ccav02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
112525250
Exosome [BR:
ccav04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
112525250
CD molecules [BR:
ccav04090
]
Proteins
112525250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
RsgA_GTPase
Zeta_toxin
AAA_29
AAA_22
ABC_ATPase
AAA_21
AAA_16
AAA_15
nSTAND1
G-alpha
DUF87
TMEM70
Motif
Other DBs
NCBI-GeneID:
112525250
NCBI-ProteinID:
XP_024991059
LinkDB
All DBs
Position
LG 13:complement(1250700..1255997)
Genome browser
AA seq
1233 aa
AA seq
DB search
MAKKGGMFHFADGIDKLLLLFGTLGCIGDGLMSPLTMVILSGIINDYGGGDLSFSNDVVN
KYALKLLVLAIGVGVAAFVEGICWTRTAERQTSRLRTEYLKSVLRQEVGFFDTQVGSSTN
FEVISAISGDAQLIHDVMAEKIPNCVTQLSALVFSIVVCFILSWRLAAASLPFTLLFVVP
VLGIKSFLKSLGMKMKDAYDIGGGVAEQAISSIRTVYSYVGEQHTIDKFSHALETSMALG
IKQGFTKGLMMGSMGMVFGTWAFIFWFGGYLVTEKGESGGRVFISAICVIMAGVAAMSAL
PNITCISEAIAATERMFTMISRAPLIDPDNSKGETLPSVRGDIEFRSVDFSYPSRPDTPV
LQELSLKVEAGKTIGLVGGSGSGKSTIISLLERFYDPVRGDILLDGYEIKRLQIKWLRSQ
LGLVNQEPVLFATSIKENILFGKETVSDDLVENAAKAANAHNFIIKLPDAYETQVGQFGI
QLSGGQKQRIAIARALLKEPRILLLDEATSALDTESERVVQEALDQASVGRTTIIVAHRL
TTVRKVDKIVVLQSGKVIESGSHEELMQKNDQEEGGAYYQMVQLQQSAKQNESHSPHSPY
TPTRQRTHEISSNPQTTQSPVSARSSLQNSPMSPFSVTHSYEESDEKIPNSSPSQWRLLK
MNTPEWRRAFLGCLGATSFGAISPIQAYCLGSVASVYFLPDKAKVKSETEFYCIIFVGLA
VACFFTNLLQHYNFAVMGERLTKRVREKMLENVLTFEVGWFDKNENTSAAVCARLATEAS
LIRSLIGDRISLLLQVFVSAFLAFIIAMIITWRIAIVLISMQPLLIASFYSKMVLMKSMS
TKAKKAQNEGTQLASEAVVNHRTITAFASQERITRLYAATQKGPRKESIKQSWFSGMGLF
TSQFVTTAAVSLAFWYGGREMSEGSVTSKQMFQVFFILMTTGKNIADAASMSSDLSKGGD
AVRSVLAVLDRKTKIDPDDSESLTVSGINGHIELMNVHFSYPSRPEQMIFQGLYLKIEAG
KTVALVGQSGSGKSTIIGLIERFYDPIKGCILIDERDLKNYNLRHLRSHIALVSQEPTLF
AGSIRHNIVYGKEEASEAEVMKAAELANAHEFISSMKDGYETYCGERGVQLSGGQKQRVA
LARAILKNPAILLLDEATSALDSASENLVQEALEKMMVGRTCVVVAHRLSTIQKSDSIAV
IENGKIAEQGSHTELLSMGNIGSYHSLIKMQHI
NT seq
3702 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaaaaggtggaatgttccattttgcagatggcatagataagcttctgctgtta
tttggtaccttaggctgcattggagatggattgatgtctcctcttacgatggtaatcctt
agtgggatcatcaacgattatggaggcggtgatctgtctttctccaatgatgtggttaac
aagtatgcactcaagctgctcgtactagctattggcgttggagtagcggctttcgttgaa
ggaatttgctggacaagaacagctgaaagacaaacatcacgtttgaggacggaatacttg
aaatccgtactcagacaagaagtcggtttctttgacacacaagttggctcttccaccaat
tttgaagttatctcagccatttccggtgatgctcaattgattcacgacgttatggctgaa
aagatacccaactgtgtaactcagctatcagcacttgtattcagcattgtagtgtgtttc
atactttcatggcgacttgcagcggcttctcttcctttcacacttctgtttgtcgttcct
gtgttaggcatcaagagtttcctaaaatctctagggatgaagatgaaagatgcttatgat
ataggtggtggggttgcagagcaggcaatatcatcaatccgaacggtttattcttatgtt
ggagaacaacatacgattgataagttcagccatgcacttgagacaagtatggcactaggg
ataaagcaaggatttactaagggtttgatgatggggagcatgggtatggttttcgggacc
tgggcatttatattttggttcggaggctatcttgtcactgaaaagggagaatctggtggc
cgtgtattcatttcagcaatttgtgtcatcatggcaggggtggcggctatgagcgcacta
cctaacatcacatgcatttcagaggcgatagctgctacggaaagaatgtttacgatgatt
tcccgcgctccactcatagatcctgataatagtaaaggggaaacgctaccatctgtgaga
ggagacattgagttcaggagtgttgacttctcatacccatcaagaccagatactccagtt
cttcaagaactcagcctcaaagtggaagctggcaagacaatcggtcttgtgggcggcagc
ggatcagggaagtcgacaattatttctttgcttgaaagattttatgaccctgtgagagga
gatatccttctcgacggatatgaaataaagaggcttcagattaaatggttaagatctcaa
ctgggattagtgaatcaagagccggtactctttgcaacatcaatcaaggaaaacatactt
tttgggaaggaaacggtttcggatgatcttgttgagaatgcagctaaagcagcaaacgca
cacaattttatcatcaagttacctgatgcttatgaaactcaagttggacagtttgggatt
caattatctggtgggcaaaagcaaagaattgcaatagcaagagctctgctcaaagaacca
agaatcttattgttggatgaagcaacaagtgcgttagatacagaatccgaaagagttgtt
caggaggctctagaccaggcttcagtaggaagaacaacaatcatagttgcccatcgcctt
acaacagtgcgtaaagttgataaaattgtggttctccaatcagggaaggttattgaatct
ggttcacacgaggagttaatgcaaaagaacgatcaagaagaaggtggtgcctactaccaa
atggtgcagttgcagcaatcagcaaagcagaatgaatcacactcccctcattctccatat
acaccaactagacaaagaacccatgaaataagttccaatccccaaacaacccagagtccg
gttagtgcaagatcaagcttgcaaaacagcccaatgtcccccttcagtgtcactcattct
tatgaagaaagtgatgagaaaatacctaattctagtccttcacagtggcgtctcttgaaa
atgaacacccccgaatggagacgagcgtttcttgggtgcctaggagcaacgagtttcggg
gctatatcaccaatacaagcctattgcttgggatcagttgcctcggtgtacttcttgcct
gataaggccaaagtgaaatcagagacggagttttactgcataatctttgtaggacttgca
gttgcttgcttcttcaccaacctactccaacattataactttgcagttatgggagagcgt
ttaaccaagagggtgcgagaaaaaatgcttgaaaacgtcctcacgtttgaagtcggatgg
tttgataaaaatgagaacacgagtgcagcagtttgtgcccggcttgcaactgaagctagc
ttgataaggtccctcattggagatcgaatatcgttgctcctacaagtctttgtcagcgca
tttcttgcttttataattgcaatgataatcacttggagaattgccattgtcctgatttca
atgcagcctttgctcatagcaagcttctactccaagatggttctcatgaaaagcatgtcc
acaaaagccaaaaaggcacagaatgaaggaacccaactagcaagtgaggcagtggtgaat
catagaacaatcactgcctttgcttctcaagaaagaatcacgagactatatgcagcaaca
cagaaaggacctcggaaggaatccattaaacaatcatggttttcgggtatgggcttgttc
acttcccagtttgtgacaacagctgcagtatcattggcattttggtatggtggaagagaa
atgagtgaaggatcggtaacctcaaaacaaatgttccaggttttcttcatcttgatgacc
acaggcaagaacattgcagatgccgcaagcatgagttctgatttatcaaaaggtggagat
gcagttaggtcagtgttagcagtactagatagaaaaacgaagatcgacccagatgactct
gaaagtttaacagttagcggaatcaacggccatatagagctgatgaatgtacacttctct
tacccatcaaggcctgagcaaatgatatttcagggattgtatttaaagatcgaagcagga
aaaacagtagcacttgtgggtcagagtggttcaggtaaatccaccatcatcggattgata
gaaagattctacgacccaataaaaggatgtatactcatcgatgaacgagacttaaaaaac
tacaatctgagacacttgagatcacatattgcactagtgagccaagaaccaactcttttc
gcaggaagtattcgtcataacatcgtctatggcaaggaggaagctagtgaagctgaagta
atgaaagcagcagagcttgcaaatgcccatgagtttataagttccatgaaagatggatac
gaaacttactgtggagaaagaggggtgcagctatcaggaggccagaagcagagagttgca
cttgctcgagcaatactcaagaatccagcaattcttytgttagatgaggccactagtgcg
cttgatagcgcgtccgagaatctggtgcaggaagcattggagaagatgatggtcggcagg
acatgtgtagtagttgcacatcggttatcaaccatacagaaatctgattccatagctgtg
attgaaaatgggaaaattgcagagcaaggatcacacactgaactgctttcaatggggaat
ataggttcctaccactctctcataaagatgcaacacatatga
DBGET
integrated database retrieval system
