Cynara cardunculus var. scolymus (artichoke): 112525338
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Entry
112525338 CDS
T05604
Name
(RefSeq) telomere repeat-binding factor 1-like
KO
K09422
transcription factor MYB, plant
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccav03000
]
112525338
Transcription factors [BR:
ccav03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
112525338
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Gene cluster
GFIT
Motif
Pfam:
Linker_histone
Myb_DNA-binding
Myb_DNA-bind_6
HTH_Hrp3
Myb_DNA-bind_5
Motif
Other DBs
NCBI-GeneID:
112525338
NCBI-ProteinID:
XP_024991199
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Position
LG 1:14944290..14950181
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AA seq
293 aa
AA seq
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MGVPKQKWTLEEEAALKAGVAKYGPGKWSTILKDSEFVSVLHLRSNVDLKDKWRNLNLMA
SGYGSRQRARPGKSKTQSIHKLENISTASKEDHDMKVCIPDPSTTLAARLQIGSSNMSMP
RLDSLILDTIANLKESHGSSRAAIAEYIEEKHSAPPNLEKLLKAELKALIGCGKLIKVKH
RYRIAPSSSYLGLKENPSLLLLEVKQEYCSMEETGATKILTKADIDAELEKMRSMTPQQA
AAVAVKAVAEAEAAISEAERAEREAQAAEADAELARVFAAAAMQSLKRTALCT
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtgcctaagcagaagtggacattagaagaggaagctgcccttaaagctggagta
gccaagtatggaccaggaaaatggagcacaattctcaaggactcggagtttgtctctgtc
ttgcatttacgttccaatgtggaccttaaggataagtggagaaatttgaacttgatggct
agtggatatggatcccgtcaaagggctagacctggaaagtcaaaaactcagtcaattcat
aagcttgaaaatatttctactgcttccaaagaagaccatgacatgaaagtttgtattcca
gatccttctacaacattagctgcacgattgcaaattggtagttctaacatgtcaatgcca
aggttggatagccttatattggataccatagctaatctgaaggagtcacatggttctagc
cgtgctgcaattgccgaatacattgaggagaagcattcagcacctcccaaccttgaaaaa
ctgttgaaagcggagttgaaggctttgataggttgcggaaaattgatcaaggtaaagcat
cggtacaggattgcaccaagttcttcatatttgggtttaaaagagaatccatccctgttg
ctcctagaagtaaaacaggaatattgctcaatggaagagacgggtgctaccaagattctt
acaaaagcagatatcgatgcagagttggagaagatgaggagcatgaccccacagcaggct
gctgctgttgctgtgaaggcagttgcagaggcagaagctgctatttcagaagctgaaagg
gcagaaagggaagcacaggcagctgaagctgatgcagagttagccagagtatttgctgct
gctgcaatgcagtcattaaagcgaactgcactttgcacatga
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