Cynara cardunculus var. scolymus (artichoke): 112525465
Help
Entry
112525465 CDS
T05604
Name
(RefSeq) helicase-like transcription factor CHR28 isoform X1
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_5
zf-RING_UBOX
zf-RING_2
zf-rbx1
zf-C3HC4_4
Prok-RING_4
zf-RING_6
zf-C3HC4_5
Motif
Other DBs
NCBI-GeneID:
112525465
NCBI-ProteinID:
XP_024991368
LinkDB
All DBs
Position
LG 13:complement(6741765..6756259)
Genome browser
AA seq
974 aa
AA seq
DB search
MEMIYISSTDSDSSDWDLDKYKALSDSDSDISLRNSSALPLLGSSSGTSTTGLHGSSQWS
LQPERKAAINGHSSHSSLDLDDQLQILSSSTNNFGSSNRHKFMDSFDNQLFRKDSERLNP
SLQPSSSRSNFPLKSVSSSQTLETYGKPYAHAWPNHAKVHMEENFSRASNDVVKDSHGRV
LTPSMNASATQYAGQSDLYRSGGVVEQAVGDERLIYQVALQDLNQPLTEATLPEGLLSVS
LLRHQKIALAWMVQKEKSVACSGGILADDQGLGKTISMIALIQNQKSLSKPKSDDSRTSK
AEALNLDDDDGIGTVVVDEEKQTGENDELKVITRVSSSTQEFRNRKPAAGSLVVCPASVL
RQWARELDEKVADEAKLEVLVYHGGNRTKDPAELAKYDVVLTTYAIVAKEVPTKFLDEDD
EDDQRNGDKYGLSSEFFNKRRKGPNPGKKKKSRKGIDGSAIDSNGTLAKVNWFRVILDEA
QTIKNSRTQVSKSCCGLRAKKRWCLSGTPIQNSIDELFSYFRFLKCDPYANYKSFCNQIK
IPISRNSMQGYMKLQAVLKAIMLRRTKGTLIDGKPIINLPPKTINLTMVDFSKEERAFYL
KLEAESRTRFKAYAAAGTLTQNYANILLMLLRLRQACDHPLLVKGFSSESVSRVSTRMGK
NLPKDMQVNLLNLLETLNICHLCSDPPEDAVITLCGHVFCYQCVSEYLTGDDNTCPSPKC
KSQIGADLVFNNATLRSLISEDGEGPSSSKVDEKSIVLQLDYSSSKIKAALEIIRTCCRS
KGSSSETPNLVRCNGDSFFSGNASSSSGIGGQVVEGPIKAIIFSQWTRMLDLVQMSLNQY
SITYRRLDGSMSLASRDRAVKEFNTDPEVIVMLMSLKAGNLGLNMVAASHVILLDLWWNP
ATEDQAIDRAHRIGQTRPVTVSRLTIKDTVEDRILALQEEKRKMVASAFGEDQSGTSTAR
LTPEDLKYLFMGAH
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atggaaatgatatatattagttcaacagatagtgattctagtgattgggatctagacaaa
tataaggcgctaagtgattcggattcagatatttctttgcgcaattctagtgctcttcct
ctgttgggatcgtcttctgggacaagtactacaggtctgcatggatcaagtcaatggtct
cttcagcctgaaagaaaagctgctataaatggacactcatctcattctagtcttgatttg
gatgaccagcttcagattttatccagttctactaacaattttggaagttcaaatcggcac
aaattcatggatagctttgataatcagttattccgaaaagattccgaaagattgaatcca
tctcttcagccatcgtcatccaggtcaaattttccactaaaaagtgtgagcagcagtcaa
actcttgaaacttatggaaaaccttatgcacatgcatggccaaatcacgcaaaggttcat
atggaagaaaatttcagccgggccagtaatgatgtggtgaaggacagccatggtagggtt
ctaactccatcgatgaacgcttcagctacacaatatgctggtcaatctgatctttatcgc
tctgggggggttgttgaacaagcggttggtgatgagaggcttatttatcaagtagcatta
caggatcttaatcaacccttaactgaagcaactttaccagaaggtcttttgtcggtctcc
ctcttaaggcaccagaaaattgccttggcatggatggttcagaaggaaaagagtgtggct
tgttctggtggaattttagctgatgaccagggccttggtaagacaatttcaatgattgca
cttatacagaatcagaaatctttatcaaaaccaaaatcagatgattctcgcacttcaaaa
gctgaagctttgaatttagacgatgatgatggcattggcacagtagttgtagatgaagag
aagcagactggagaaaatgatgaattgaaggtgatcacaagggtcagtagctcaacacaa
gaatttcgtaatcggaaacctgcagcaggatcgttggtcgtgtgcccagcaagtgtgctg
cgacaatgggccagagagctggatgagaaagttgcagatgaagctaagcttgaagttcta
gtttatcatggcggcaataggacgaaagatcctgcagaactagcaaaatatgatgtagtt
cttacgacatacgccattgtggcaaaagaggtcccaactaagtttttggacgaggatgat
gaagatgatcaaagaaatggggacaagtacggattatcttccgagtttttcaataagaga
aggaaagggcctaatcctggtaagaaaaagaagagcagaaaaggtattgatggttctgcc
attgatagcaatggtactcttgcaaaggtgaattggttcagggtgatattagatgaagct
caaacgataaaaaatagcagaacccaggtgtctaaatcgtgttgtggtcttagagcaaaa
aaaaggtggtgcttgtccggaacacctatacaaaactcaattgatgaactattcagctat
ttcagatttctaaaatgtgacccatacgcgaattataaatctttttgtaatcaaataaag
atcccaatatccagaaactcaatgcagggttatatgaaacttcaagctgtgctgaaggca
ataatgcttcgtcgaacaaaaggcactttgatcgatggtaagcctatcatcaacttacct
ccgaaaacaataaacttgacaatggtggacttctcaaaagaggaacgtgctttctatctc
aagcttgaagctgaatcacgcacacgattcaaggcgtatgctgctgcaggtactttaact
caaaattatgcaaatatcctattgatgcttctgcgccttcgccaggcttgcgatcacccg
ttgcttgttaagggatttagctcagaatctgtcagtagagtttctaccagaatgggaaag
aatctccccaaggatatgcaagtgaatttgttaaatctcttggaaactctcaacatatgt
cacttgtgtagcgatccaccagaagatgctgtcattaccctctgtggacatgtattttgt
tatcagtgtgtatcagaatacctgactggggatgacaatacatgtccgtcaccaaaatgc
aaaagccagattggcgctgatcttgtatttaacaatgccaccttaagaagtcttatctct
gaagatggtgagggcccgagttcatccaaagttgatgagaaatctatagttcttcagctt
gattatagttcttccaagatcaaagctgctctggagattattcggacctgttgcagatca
aaaggttcaagttcagaaacaccaaatctagttagatgcaatggtgattctttcttttca
ggaaatgcatcttctagttcgggtattggtggtcaggtggtcgaaggaccaataaaagca
attatattctcccaatggacaagaatgctggatctcgttcaaatgtcgcttaatcagtat
tccattacatacaggaggcttgatggttcaatgtctctagcttcaagggacagggctgtc
aaagaattcaacaccgatcctgaggtaattgttatgttgatgtccctgaaagctgggaat
cttggtctgaacatggttgctgcatctcatgttattcttttggatctttggtggaatcca
gctactgaagatcaagctattgaccgagctcacagaatcggacagacgcgtcctgttaca
gtctcgagactcactattaaggacacagttgaggacagaattcttgctctccaggaagag
aaaaggaaaatggttgcatccgctttcggtgaagatcaaagtggaacttcgaccgctcgt
ctaacaccagaagatctaaaatatttgttcatgggagctcattga
DBGET
integrated database retrieval system
