Cynara cardunculus var. scolymus (artichoke): 112525484
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Entry
112525484 CDS
T05604
Name
(RefSeq) chaperonin 60 subunit beta 4, chloroplastic-like
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
112525484
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccav03019
]
112525484
03110 Chaperones and folding catalysts [BR:
ccav03110
]
112525484
03029 Mitochondrial biogenesis [BR:
ccav03029
]
112525484
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccav04147
]
112525484
Enzymes [BR:
ccav01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
112525484
Messenger RNA biogenesis [BR:
ccav03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
112525484
Chaperones and folding catalysts [BR:
ccav03110
]
Heat shock proteins
HSP60 / Chaperonin
112525484
Mitochondrial biogenesis [BR:
ccav03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
112525484
Exosome [BR:
ccav04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
112525484
Exosomal proteins of other body fluids (saliva and urine)
112525484
Exosomal proteins of breast cancer cells
112525484
Exosomal proteins of colorectal cancer cells
112525484
Exosomal proteins of bladder cancer cells
112525484
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF7621
Motif
Other DBs
NCBI-GeneID:
112525484
NCBI-ProteinID:
XP_024991399
LinkDB
All DBs
Position
LG_13
Genome browser
AA seq
546 aa
AA seq
DB search
MVAELIGVTLGPRGRNVVLQNKYGPPRIINDGETVLKEIQLEDPLENVGVKLVRQAGAKT
NDLAGDGSTTSIMLAQGLIAEGVKVIAAGMNPIQISRGIQRTAESLVSELKLMSREVEDH
ELSDVAAISAGNDFEVGSMISEAIQKVGRRGVITIEKGNCAENNLQIVEGMQFDRGYMSK
YFTDRRTMKAEFQDCKLLLVDKIITNPKEMYRILDMAVKGNYPIIIIAEGIEQEALAPVI
RNKLKGVLKAAAVKAPAFGERKSHYLDDIAILTGGTVVRDDAGLTLERVQEDVLGTASEV
VITKDSTLIVTDGSTQAAVKRRVTQLQRLVENTEENFQKKILNERIARLSGGIAIIKVGA
QTQVELKDKQLRMEDAVNATKAAIEEGVVVGGGCCLLRLSLKVNEIKELMDNEEQKIGSD
IFKRALEYPARQIAKNAGVNGSIVVEKVLSNDDMRYGYNAASNQYEDLMAAGIIDPTKVM
RCCIEHAASVAKTFLTSDAVVIDIDGPVAKGMRPPKQTPKPTPTPTPTPTPTPMSMPPSG
IGPMGF
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggtggcagagctgattggagttactttgggtccaaggggtagaaatgtggtgttgcaa
aataagtatggccctccaaggattattaatgatggtgaaaccgttctcaaagagattcaa
ctagaggaccctcttgagaatgttggtgtgaaattagtgagacaagctggtgcaaaaaca
aacgatctagctggtgacggttccaccacatctattatgcttgcccagggcctcattgct
gaaggtgtgaaggttattgcagcaggcatgaatcctatacagatatcacgagggattcag
agaactgcagaatcccttgtctcagaactcaagttgatgtctagagaggttgaggatcat
gagctttcagatgttgctgccatcagcgcaggtaacgattttgaagtgggaagcatgatt
tctgaagctattcaaaaagtaggaaggaggggtgttatcactattgagaaagggaattgt
gctgagaacaatctgcaaatcgtagaggggatgcaattcgatcgtggctacatgtctaaa
tattttactgatcgaagaactatgaaagcagaatttcaagattgcaagttgcttttggtt
gacaaaataattacgaatccgaaggagatgtatagaatattggacatggcagttaaaggg
aactatccaattatcataattgccgagggcattgagcaggaagctctggctccagtaatt
aggaacaaactcaagggcgtactgaaggcagcagctgtcaaagctcctgccttcggtgag
cgcaagagccactacttagatgacattgctatcttgactggaggaactgtggtcagggat
gatgccggtttgacccttgaaagggtccaagaagatgtgcttgggactgcgagtgaggtg
gtcattaccaaagactccacactaatagttaccgatgggagcactcaagctgctgtcaag
agaagggtcactcagctccaaaggcttgttgagaacaccgaagaaaattttcaaaagaaa
attcttaatgaaaggattgcaaggttgtcaggaggaattgctattatcaaggttggagct
caaacacaagttgaactgaaagataaacaattgaggatggaagatgctgtaaatgcaacc
aaggctgctattgaggaaggagtcgtagttggtggtggctgttgtcttttgaggctatct
ttgaaggtgaatgaaataaaagagcttatggataatgaagagcagaagataggatctgac
atattcaaaagagctttggaatatccggcaaggcagatagccaaaaatgctggtgttaat
ggtagcattgttgtagagaaggttttgtccaacgatgatatgaggtatggatacaatgct
gcaagcaaccagtatgaagatctgatggctgccggtatcatagacccaacaaaggtaatg
agatgttgtatagagcatgcagcatcggtggcaaagacatttttgacttctgatgcagtt
gtgattgatatcgatggaccagtggccaaaggaatgagaccgccgaagcaaaccccaaag
ccaacgccaacgccaacgccaacgccaacgccaacgccaatgtcaatgcctccctctgga
attggtccgatgggattttaa
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