Cynara cardunculus var. scolymus (artichoke): 112525501
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Entry
112525501 CDS
T05604
Name
(RefSeq) syntaxin-81 isoform X1
KO
K08492
syntaxin 18
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04130
SNARE interactions in vesicular transport
ccav04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
112525501
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
112525501
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccav04131
]
112525501
Membrane trafficking [BR:
ccav04131
]
SNARE
Syntaxin (Qa)
Stx-rER
112525501
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin-18_N
SNARE
Motif
Other DBs
NCBI-GeneID:
112525501
NCBI-ProteinID:
XP_024991423
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Position
LG_13
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AA seq
313 aa
AA seq
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MAKIRDRTEDFKDAVNRGALSLGFNEAKRAALLASFIMHKPRERSHFTKAALKTLESIGT
LEQFLIKHRKDYVDPHRTTAEERDSIEHEVSVFVKACKEQIDILKNSITDEEANSKGWLG
IRGDANADTIAHKHGVVLILSERLHSVTSQFDQLRAVRFQDAINRAMPRRKPKRAPEKTS
NDVFQSSNSQETREAASSGEIQAEPMKVQQQQLLDDETRALQVELSSLLDAARDTETKMV
EMSALNHLMSTHVLQQAQQIEYLYDQAIEATKNVEMGNKELTQAIQRNSSSRTFLLLFLI
VLTFSVLFLDWYS
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atggctaagattagagatcggactgaggactttaaagatgctgtcaacaggggggcgttg
tctttgggatttaacgaggccaaaagggcagctctgttggcatcttttatcatgcataaa
cctcgggaaagatcacatttcacgaaggctgcgttgaagacgctagagagcattgggact
ttagagcagttcttgataaagcataggaaggattatgtagaccctcatcgtaccacagca
gaggagagagacagcattgagcatgaagttagcgtatttgtgaaagcctgtaaagaacag
attgacatactgaaaaatagcataactgatgaagaagcgaattcaaagggttggcttggc
atcaggggtgatgctaatgctgatactatcgcgcacaaacatggagtggttttgatctta
agtgaaaggcttcattcagtcacatcacaatttgatcaactccgagctgtacgctttcaa
gatgctattaatcgagctatgcctaggagaaaaccaaagcgggctcctgagaaaacttct
aatgatgtctttcaatctagcaacagtcaggagacaagggaagcagcaagttcaggcgaa
attcaagccgaacccatgaaagtccagcagcagcagcttttagatgatgaaacacgtgct
cttcaggtggagttgtcaagccttcttgatgctgcccgtgacaccgaaaccaagatggta
gagatgtcggcattgaatcatctcatgtcaacgcatgtcttgcaacaggctcaacaaata
gagtatttgtatgaccaggcgattgaagcaacgaagaatgtagagatgggtaacaaggag
ctgacccaagccatccagcgaaatagcagtagcagaacattccttttgcttttcttaatt
gtgcttactttttctgttctttttctcgactggtacagctga
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