Cynara cardunculus var. scolymus (artichoke): 112525502
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Entry
112525502 CDS
T05604
Name
(RefSeq) putative H/ACA ribonucleoprotein complex subunit 1-like protein 1
KO
K11128
H/ACA ribonucleoprotein complex subunit 1
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
112525502
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccav03009
]
112525502
03032 DNA replication proteins [BR:
ccav03032
]
112525502
Ribosome biogenesis [BR:
ccav03009
]
Eukaryotic type
Sno RNPs
Box H/ACA snoRNPs
112525502
DNA replication proteins [BR:
ccav03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
Dyskerin complex
112525502
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Gar1
AnkX_ins
Zn_ribbon_ZPR1
Motif
Other DBs
NCBI-GeneID:
112525502
NCBI-ProteinID:
XP_024991427
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All DBs
Position
LG 13:complement(8733310..8736344)
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AA seq
198 aa
AA seq
DB search
MRPPRGGGFSSRGRGGGGFRGGRDGGGRFGGGRGGRGGGRFGGDRFNDGPPEQVVEVSSF
VHACEGDAVTKLTNEKIPYFNAPIYLENKTQIGKVDEIFGPINESFFSVKMMEGIVATSY
GAGDKFYIDPMKLLPLARFLPQPKGASTGGRGGGRGGGRGGGRGGSFRGRGAPRGGRGGG
FRGGGGRGGGFSRGRGRY
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atgcgacctccmaggggcggcggattcagtagtcggggtcgtggcggcggcggattcagg
ggtggtcgggatggcggtggccgatttggtggtggccgtggtggacgaggtggcggtcgt
tttggtggtgaccggtttaatgatggcccccctgagcaagttgtagaggtttcgtcgttt
gttcatgcttgtgagggagatgcagtgacaaagctcactaacgagaaaataccctatttt
aatgccccaatttaccttgaaaacaaaactcagattggcaaagttgatgaaatctttggt
cccatcaatgaatctttcttctcggttaaaatgatggaaggtattgtagcaacttcatat
ggggctggtgacaagttctacattgatccaatgaagctattaccactagccagatttctt
ccacagccaaagggagcaagcactggcggaagaggaggtggacgtgggggtggaagaggt
ggcgggcgtggtggttctttccgtggtagaggtgcaccaagaggtggtagaggcggtggg
tttcgtggtggtggcggtcgtggcggtgggttcagtaggggccgagggagatattag
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