Cynara cardunculus var. scolymus (artichoke): 112525505
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Entry
112525505 CDS
T05604
Name
(RefSeq) ATPase family AAA domain-containing protein FIGL1 isoform X1
KO
K22766
fidgetin-like protein 1 [EC:5.6.2.-]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccav03036
]
112525505
03400 DNA repair and recombination proteins [BR:
ccav03400
]
112525505
Chromosome and associated proteins [BR:
ccav03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
112525505
DNA repair and recombination proteins [BR:
ccav03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
112525505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
FIGL1_N
AAA_lid_3
Vps4_C
AAA_5
AAA_22
TIP49
RuvB_N
AAA_16
AAA_14
Mg_chelatase
IstB_IS21
ABC_tran
nSTAND3
Motif
Other DBs
NCBI-GeneID:
112525505
NCBI-ProteinID:
XP_024991432
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All DBs
Position
LG 1:complement(11545771..11551327)
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AA seq
670 aa
AA seq
DB search
METEPKPSSSEASVCWRKELDTNLKRLQSLLFGADIAIQKRDYSYAQLLSLRLIGFLDSR
SINDVDEAFIRPIRREALSKLDSATQSLIPESDRQAFEQAGRDPGFVFQKQGDIKIEKIK
QSKYFKALLQQAKGNTLNEVPDGGGCLTDDEPEKLEDISAKTSKVLLHGKSTTLNGSISR
ANNNMHNNSVNSRGNGSEDCILVQGHGSFTCINVDEERTHGSSLRSKRAHMEISSPRNET
VLSPSSKSEANAGISGNSFVTARTKLEMDVRQKRGLDGSPNSSVSPQSDGTNRGYGVRSY
GSRRGIRGFVPPIRSNSGNNGNVTSRAAKGEDALDDSTKRCMDMLCGPDGELPEKLRNLE
PRLIEHISNEIMDRDPNVRWDDIAGLHHAKKCVTEMVIWPLLRPDIFKGCRSPGRGLLLF
GPPGTGKTMIGKAIAGEAKATFFYISASSLTSKWIGEGEKLVRALFGVASCRQPAVIFVD
EIDSLLSQRKSDGEHESSRRLKTQFLIEMEGFDSGSEQILLIGATNRPQELDEAARRRLT
KRLYIPLPSAEARAWIVRNLLEKDGLFKLSTEDIDSICKLTEGYSGSDMKNLVKDASMGP
LREALRQGTEITKLKKEDMRPVTLQDFENALQEVRPSVSVNELGTYEDWNNQFGSLSVST
DLIDTYIPPH
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atggagacagaaccaaaaccatcgtcgtcggaagcgtcggtctgctggagaaaagaattg
gatactaacctcaagaggctccaatctcttctattcggcgccgacatcgctatccagaag
cgagattacagttatgctcaattactctcccttcgtctcattggtttcctcgattctcgg
tccatcaacgacgtagatgaagccttcattcgtcctattcgccgtgaagccctctctaaa
ctcgattccgctactcaatcactcattcctgaatccgatcgtcaagcttttgagcaagct
ggtagagatccagggtttgtttttcagaagcaaggggatatcaaaattgagaaaattaag
caatcaaaatatttcaaagctcttctccaacaggctaaaggaaatactctaaatgaggta
ccagatggcggtggatgcttaactgatgatgaacccgaaaagctggaagatatcagtgcg
aagacttcaaaagttcttttacatggaaaatcaacaaccttgaatggaagcatctcaagg
gcaaataacaatatgcacaataattctgtcaactcaagaggaaatggttcagaggattgt
atccttgtccagggccatggttcgtttacatgtattaatgttgatgaagaaagaacacat
ggaagtagcttgagatctaagcgagctcacatggaaatcagtagcccaaggaatgaaaca
gtcttgtctccatcaagcaagagtgaggctaatgctggtatttctggcaacagttttgtt
actgctagaacaaaattggaaatggatgttcgacaaaagagagggttggatggatcacca
aattcctcggtctccccgcagagcgatggaactaacagaggctatggtgtcagatcctat
ggctcacgccgtggaatacgtggttttgttccccctattagatccaactcgggtaataac
ggcaatgtaacatcacgtgcagcaaagggtgaagatgcattagacgattcgacaaaaaga
tgcatggatatgctttgtggccctgatggtgaacttccagagaagttgcggaacttggag
cctcgccttattgagcacattagtaatgagataatggaccgtgatcctaatgttcgctgg
gatgatattgctgggttgcatcatgcaaaaaaatgtgtaactgagatggtcatatggcct
ttattacgtcctgatatttttaaaggttgccgttctccaggtcgagggcttcttctgttt
ggtcccccaggaacaggtaaaacgatgataggtaaagctatcgctggagaggctaaagca
acatttttttacatatctgccagttcactaaccagcaaatggatcggagagggtgaaaag
ctagtgagggcactttttggagttgccagttgccgccaaccagcagtgatatttgtggat
gaaattgattcactgctgtcccagcgcaagtcagatggtgagcatgagtcaagcaggcga
ctgaagacacagtttctcattgaaatggaaggatttgacagtggaagtgaacaaattcta
ctcataggagcaacaaatagaccacaagaactagatgaggcagctaggaggcgacttacc
aagcgactttatattccactcccttccgcagaagcgagagcctggatagtacgtaatctc
ttggagaaggatggacttttcaaactgtctacagaggatattgatagcatatgcaaattg
accgaagggtattcaggatctgacatgaagaatttagtgaaagatgcttccatgggtcca
ttgagagaggctttgagacaaggcaccgaaatcactaaacttaaaaaggaggatatgaga
ccagttactctacaggactttgagaatgcactacaagaggtgaggccttctgtttccgtg
aatgaacttggcacatatgaagactggaacaatcaatttgggagcttatcagtatcaact
gatctgattgatacttacatacctcctcattaa
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