Cynara cardunculus var. scolymus (artichoke): 112525509
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Entry
112525509 CDS
T05604
Name
(RefSeq) methyl-CpG-binding domain-containing protein 9 isoform X1
KO
K22768
methyl-CpG-binding domain-containing protein 9 [EC:
2.3.1.48
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccav03036
]
112525509
Enzymes [BR:
ccav01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
112525509
Chromosome and associated proteins [BR:
ccav03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
112525509
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD
WSD
WHIM1
FYRC
PHD_2
Bromodomain
MBD
FYRN
PHD-1st_NSD
DUF7028
Phage_zn_bind_3
PHDvar_NSD
Motif
Other DBs
NCBI-GeneID:
112525509
NCBI-ProteinID:
XP_024991433
LinkDB
All DBs
Position
LG_13
Genome browser
AA seq
1936 aa
AA seq
DB search
MEHSGSANSSIAGTSGRSVALEIDLNEAPLPSPREVVGGSAVGGFAAEHRCGSCGEVEGS
MVVCGDCGRRFHVKCLGVREEQRGWKCFECLIECRSGRRLSRAAGSGGGSGLFDMNASPP
READGCEEDYFVNSNLVLAATFPKMHDMRRNPFVGFALSSPMAHSDMKFVASGFPSQNVA
CSMTRMAHLNLENATQKGNLVYLQALKDYISKNRGVLGDGWRVKFEYSESSCKTSAIYFS
PDGARFNSMSEVAHCLGLIATPFETEDEGSGIVLLQKGSHSTKRTKDALRSQRGNNVKEH
KNMLRSKDSNGGNAIEVDSVANGTYGSQSFRDDFPVQFEGFFVISVGKVDPRPSFHTTSQ
ICPVGYRSIWHDKFTGSIFVHDVLDGGECGPIFRVHRYPCTNQSIPYASKVLCMIKCGSN
HWDNADSAINGTFHDDDDANIHMMFTEHSPPHLDDDDDSSSCSLKITSCLTAEPSVSLQK
AQGITSKNDLIGEFSVEERSLSSAWQKAVETLLRACRKAYAKKNALTFCCNHHVDGQDLS
GSYDIDSLGKFCSLAGPVDSIPEMILTVEELESACEVLGKWLEPDRFGLDAEFVQELIEQ
LPGVSACSKYKSLNARCQSSTSQTVMSGFFMAISKNGLPHEMVSNSLRRSHKRPSPPGNT
VTSILPPHLIGDVLQAYEICLRFYEVLGQEAPVSRQVMENELMNPWVDDLKPVKRSSIDF
QKNGIMKACEVDRRDGIPSVDGEDSVDAAEEHEGDGSRAEAASKCTGVELAKFHMALLKV
LIEDVLVKVKEIFDPFGAMESKTRKGRKKDVDVAVGSKKINLDMFPVNEFTWPELARRYI
LVVLSMDGNLESSEVMTRECGKVFHCLNGDGGTLCGSLTGVAAMEADAMVLAEASKKIFS
SVNSKVVDFIIDQKEIDTGDSAKETNLIDDDAPEWMQVLEPVRKLPTNVGARIRRCIHES
LNKNPPEWAKKILEHSISKEVYKGNASGPTKRAVISVLEKVRVENPQQKPTEKKEKEKSG
VRTLSDAVMKRCRVVLRSVAAADDDRVFFNLLAKTFLKPNDPDDAGVLGYPAMVSRPLDF
RTIDLRLAAGFYVTSHESFIEDVREVWQNLRIAYRDKHDHIELVETLSRKFEELYEEEVL
NLVSRIMESGNSFDSSSEEGKKELNTLLVETSESSLPPAPWEDGVCKVCGMDKDDDSVLL
CDKCDSEYHTYCLDPPLARIPDGNWYCPSCISSQSTPQDERCGTRALCRWRGKKKLRKEF
TRNLMETLAPLADAMELIEYWELGIEERVFLFKFLCDEALSSGVVRNHLGPDSGDLEKKL
RKLYKELKNQNKREESLVSTSAKESEDRCQEEYWSFSKSSDSQSQVQNEENDENRHVKAS
QDQESVSQENRLEAADVKNRVSSLQERISTLESKIAKPVVRREYLGRDLVGRHYWVLSDP
ERLVVSGPHSRRKASAASSSFLSRLNECEMPELYASDDALWTCYESDTEIQELIGWLRDD
DSREKELKETIIQWQTNRPNDANAPQNRVQTGQANPCYGTKARAALEKKFGSSMEQGAIQ
FSKKQGRKGKMINKGKWYRCDCLELVGPTRHHCSSCHWTFLTNEELDGHNDGKCENRQEC
EGPSKSKKVPFDKQPALTARRDEPDSPFVFEEIRAKFCTRSSLKEEVKDIGLIGSNGIPS
FLGKVPSPNSDAALLLVSETKKWVNSYDGSTDYQPSEKQGTNETPSKVERLKPKGTSGKS
SLKNKTPVRICQSSLKPLMGRVLEILRLLKINLFDMETALPQEALRPSRGGLDRLRAWCA
FVKSAQSIYEMVQATIMLEDMIKTEYLRKEWWYWSSPSTAAKISNISALSLRIYALDAAI
YYDKPPVDPTEPVTPKSSRSEKKTSEKSNAKDSSEKSNPKNNHRSSSSPSVTDSKAAEPP
SRPKTRSKKRMRDSDS
NT seq
5811 nt
NT seq
+upstream
nt +downstream
nt
atggagcattcggggtccgctaattcttcaatagctggaactagtggtcgttcagtggct
ttagaaattgatcttaacgaagcccctcttccttctcctcgagaagttgtcggtggcagc
gccgttggtggttttgcggcggaacaccggtgcggttcttgtggtgaggtggaagggtcg
atggtggtgtgtggtgattgtgggagacggtttcatgtaaagtgtttgggggtgagagaa
gagcaaaggggttggaagtgttttgagtgtttgatagaatgccgcagtgggaggaggttg
tcgcgagctgccggaagtggtggtggttcagggcttttcgacatgaacgcctctcctcca
cgagaagcagatggctgtgaggaggattatttcgtaaattcgaacctagtattagcagcc
acctttccaaaaatgcacgatatgcggcgtaatccttttgttggatttgctttaagttct
ccaatggcccattcagatatgaagttcgtagctagtggatttccatcccaaaatgtcgct
tgcagtatgacacggatggcacatttaaatcttgaaaacgcaacacaaaaaggcaatctc
gtgtatctgcaggcacttaaagactacatatccaaaaaccgaggtgttctaggagatggg
tggcgtgttaaattcgaatactccgaaagcagttgcaaaacttctgcaatttacttttcc
ccagatggagctagattcaattccatgtcagaagttgctcattgtcttggtttaatagca
acaccttttgaaacagaagatgagggtagtggcattgtattattgcagaaaggatcgcat
tctacgaaaagaacgaaggacgctctaaggtcacagaggggcaataacgtcaaagagcat
aagaatatgttgcgcagcaaggacagcaatggcggaaatgcaatagaagttgactctgtg
gctaatggtacttatgggtcacaatcatttcgtgatgatttcccagttcagtttgaaggg
ttctttgttatatcagttggcaaagttgatccacggccttcattccacactacctctcaa
atctgccctgtaggttatcgatccatctggcacgataagttcactgggtccattttcgtc
catgacgttttagatggtggcgaatgtggcccaattttcagagtacataggtacccatgc
accaatcagtcaattccctatgcttcaaaagtgctctgcatgataaaatgtgggtcaaat
cattgggataatgccgattctgctattaatgggacatttcatgatgatgatgatgcaaac
attcacatgatgtttacagaacatagtccaccccatctagatgacgatgatgatagttct
tcgtgttctttgaagataacaagttgtttgactgccgaaccgagcgtttctcttcaaaaa
gctcaaggaatcacctccaaaaatgatcttatcggtgaattttcagtggaagagcgctct
ttatcatctgcttggcagaaagccgtagaaactctactacgtgcatgccgtaaagcttac
gccaagaaaaacgctctaactttttgttgcaatcatcatgttgacggacaagatcttagc
ggatcttacgatattgactcattagggaagttttgttctttagccggccctgttgacagc
atcccggagatgatactgacggttgaggagcttgaatccgcttgtgaagtgcttggaaaa
tggttagaaccggatagatttggtttagatgcagaatttgtacaagaactcatagaacaa
cttcctggggttagcgcctgttccaaatataaatctttgaatgcacgatgtcaaagctcg
acttcacaaactgtcatgagtgggttctttatggctataagtaagaacggtttaccacac
gagatggtgtcaaatagtctcagaagaagccacaaaagaccgagtccgccaggcaacacg
gtcacctctatccttcctcctcatttgattggtgatgttcttcaggcctatgagatctgc
ttgcggttttatgaagttctgggccaggaggcaccagtatctagacaagtgatggagaat
gagctcatgaacccatgggttgatgatttgaagccggtgaaaagatcatcgattgatttt
caaaagaacgggatcatgaaagcatgtgaagttgacagacgagatggtattccctctgtc
gacggtgaagattctgttgatgcagcagaagaacacgagggagatggttctcgagcagaa
gcagctagcaaatgtacaggtgtcgaactggcgaaattccacatggcactactaaaggtg
ctaatagaagacgtgctagttaaagttaaggaaatctttgatccttttggtgccatggag
tcgaagacaagaaaagggaggaagaaagatgtggacgttgcagttggtagtaagaagata
aatcttgatatgtttcccgtgaatgaatttacttggcccgaactagcccggagatacatt
ttggttgtgttgtctatggacggtaaccttgagtcttcggaggtcatgactcgtgagtgt
ggtaaagtgttccattgcttgaacggtgatggtggcacgctttgtggttcacttacagga
gtggcggcaatggaggctgatgccatggttctagcagaagcctccaagaaaatcttttct
tctgtaaacagtaaagttgtcgactttattatagatcagaaagagatcgataccggagac
tctgccaaggaaacgaatttaatcgatgatgacgcccccgagtggatgcaggttcttgaa
cctgtaaggaagttacctactaacgttggtgcaagaattaggcggtgcattcatgaatct
ttaaacaaaaatccacccgaatgggcgaaaaagatattggaacactcgataagcaaagaa
gtctataaaggcaacgcatcgggaccaacaaagagagctgttatctcggttcttgagaaa
gtgagagtcgaaaatcctcagcagaagcccaccgagaagaaagagaaggaaaagagtggt
gtcagaacactatccgatgctgttatgaaacggtgtcgtgtagttttacgctctgttgct
gctgcagatgatgaccgagtttttttcaatcttttggcgaaaacatttttgaagccaaat
gatccggatgatgcgggagttcttggatatcctgcaatggtttcccgtccattagacttt
cggacaattgacctgagattggctgcgggcttttatgtcacttctcatgaatctttcatc
gaggatgttcgtgaggtttggcagaatttacgaatagcttatcgtgacaaacacgatcac
attgagttggttgaaacgctatcgagaaaatttgaagaattgtatgaggaagaggtactt
aacctggtcagcagaattatggagagtggcaacagttttgattcgtcaagcgaagaaggg
aagaaagagttaaatactcttctcgttgagacaagtgagagctcactcccccctgcacca
tgggaggacggggtgtgtaaagtatgtgggatggataaagatgatgatagcgtattatta
tgtgataaatgtgattccgaataccatacatactgtttagatcctccacttgcaaggatt
cctgatgggaattggtattgcccttcatgcatttcaagtcaatccactccacaagatgag
cgttgtgggacccgagcactatgtcgttggcgtggaaagaagaaacttcggaaagaattc
actcgaaatctaatggagacactggctccattggcggatgcaatggagttaatagagtat
tgggaattaggcatcgaggagagagtttttcttttcaaattcttatgtgatgaggccctg
agctctggagttgttcgaaatcacctaggtcccgactcgggtgatttggaaaagaagttg
cgaaagctctacaaagagttgaaaaaccaaaataaaagagaagaatctctggtttcaact
tcggctaaagaaagtgaagatagatgtcaggaagagtattggtccttttcaaaatctagt
gatagtcaaagtcaagtacaaaatgaagaaaatgacgaaaataggcatgtaaaagcgagc
caggatcaagaatcagtttcgcaggaaaacagactagaagcagctgatgtcaagaatagg
gtttcttctttacaggaaagaatttcaactttggaatcgaaaatagcgaaacctgttgtt
cgaagagagtatttggggagggatttagttggaagacactattgggttcttagtgatcct
gaaaggttggttgtgtcgggcccacatagtagacggaaggcatctgcagcctcttccagt
ttcttgtcgagattgaatgaatgtgaaatgcctgaattgtacgcatctgatgacgccttg
tggacttgctacgaatccgatacagaaattcaggagctcattgggtggctaagagacgat
gattcaagagagaaagaattgaaagagaccatcatacagtggcaaacaaatagaccaaat
gacgctaatgccccccaaaaccgtgttcaaacaggtcaagcgaatccctgttatggcacc
aaagcaagggcagcattggaaaagaagtttggttcttccatggaacaaggggcgattcag
ttttcgaagaagcagggtcgaaagggtaaaatgatcaacaaggggaaatggtacaggtgc
gattgtttggagttagtggggcctactcgacaccattgctcatcatgccactggacattt
ttgactaacgaggagctagatgggcataacgatggaaaatgtgagaatcgtcaagaatgt
gaaggtccctcgaaatctaagaaggttccatttgacaagcagccagctttgacagctcgt
cgtgatgaacctgattcaccattcgtctttgaggagattcgggccaagttttgcactcga
agttctcttaaagaagaagtcaaagatatagggcttatcgggtcaaacggaatcccatcg
tttctaggaaaagtgccttcaccgaatagtgatgctgctttattgttagtttcagaaacg
aaaaaatgggttaattcctatgacgggtcaacagattatcagccgtcggagaaacagggt
acaaatgagacaccatctaaggttgaaagattgaagcccaagggtacaagtggaaaatct
tcattgaagaacaaaactccggtgcgtatttgccaatcgtccttgaagccgttaatgggc
agggttcttgaaatccttcggttgcttaagatcaatttgtttgatatggaaactgcactc
ccacaagaagctttgagaccttcaaggggaggcttggatcgtttacgtgcttggtgtgct
tttgtgaaatcggcacaatcaatttatgagatggtacaagcaacaatcatgctagaggac
atgattaaaacagagtatctgagaaaagaatggtggtattggtcatcaccttcaaccgct
gctaaaatctccaacatttccgctctttctctacggatatacgcccttgatgcagccatc
tattacgacaaacctccagtagaccccacagaacccgtaacacccaagagttccaggtca
gaaaagaagacatccgaaaagtcaaatgcaaaagactcatctgaaaagtcaaacccaaag
aacaatcatcggtcaagcagctcaccatccgtcactgattcaaaagccgccgagccacct
tcaagaccgaaaacgagatcaaagaagaggatgagagattctgacagttaa
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