Cynara cardunculus var. scolymus (artichoke): 112525559
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Entry
112525559 CDS
T05604
Name
(RefSeq) vacuolar protein sorting-associated protein 25-like
KO
K12189
ESCRT-II complex subunit VPS25
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112525559
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccav04131
]
112525559
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccav04147
]
112525559
Membrane trafficking [BR:
ccav04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
112525559
Exosome [BR:
ccav04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
112525559
Exosomal proteins of colorectal cancer cells
112525559
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ESCRT-II
WHD_CHMP7_1st
WHD_GTF3C1
GntR
Motif
Other DBs
NCBI-GeneID:
112525559
NCBI-ProteinID:
XP_024991504
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All DBs
Position
LG 13
Genome browser
AA seq
179 aa
AA seq
DB search
MQTLGDHKLPHFFNYPPYFTLQPVRETREKQIQLWKELILDYCRTQKKFVINVEEDFPLF
SNPAIERSLNHEARVAFLSALVLDGRAEWMDKSHRQCLILWHRIKDWADIILRFVKENGL
EESVMTVEEIRSGIESRGTEIHGMDRTVLMRALKLLENKGKLAIFKGSSTDDEGVKFSV
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atgcagacccttggtgatcataagttgccccacttctttaattatccgccctacttcacg
ttgcagcctgtgagagaaacccgagagaagcaaatacaactctggaaagaacttattctt
gattattgtcggacgcaaaagaaatttgtaattaacgtggaagaagactttcctctgttc
tccaaccctgcaatagaaagatctctgaatcatgaagcaagagtagccttcctgtcagct
ttagtcctggatggacgtgcagaatggatggacaagagtcataggcaatgtcttatcctc
tggcatcgaataaaagattgggcagacattatattacgctttgtcaaggagaatggctta
gaggagagtgtaatgacagtggaggaaatacgttcagggattgaatctcgtggaacagaa
atccatggaatggaccgaacagttctaatgagagcacttaaacttctggaaaacaaggga
aagcttgcaatcttcaagggaagttcaacagacgatgaaggagtaaaattttctgtctaa
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