Cynara cardunculus var. scolymus (artichoke): 112525646
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Entry
112525646 CDS
T05604
Name
(RefSeq) protein GLE1-like isoform X1
KO
K18723
nucleoporin GLE1
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03013
Nucleocytoplasmic transport
ccav03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
112525646
03015 mRNA surveillance pathway
112525646
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccav03019
]
112525646
Messenger RNA biogenesis [BR:
ccav03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
112525646
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GLE1
Borrelia_P83
Motif
Other DBs
NCBI-GeneID:
112525646
NCBI-ProteinID:
XP_024991626
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All DBs
Position
LG 13:complement(1223243..1234142)
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AA seq
653 aa
AA seq
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MTRGGVKLELRCPQRVGGIVADPQIDWSFDELLSELNAVDHRLQASSLVSLPFTKTHSSD
LSVVSHAGKNRKSFVMHVSDDEGDYDDEGNYSRPLAMGGRFACEEVYLSDDADSDNESTT
GAQWSLMDKGGVIEGALIELSHEHQITVAEDIRTRISAFGTDLTNEKEKLTNALSRAEKS
KEARRELDRKRDLQYQRIIAEALDNHLTDVQRHHEYKSQIEEKKIRDDAAIEEAKRKQKA
LQEEKVRQEKMKAEEAKRQAEKKRDEEAKAAALEAERAAKEAAVAESQRKAAEAMTASQG
AVSKGSDSGGPKKTPAGNILKGAESALKMEERRLQMYKEVVGKDVASEMDYNKEYRSHGM
QMARRIKTITGTKENVRTKADELVKLMNSTCPQSVNIGIFAEKVVSQSTNASSNNVLYGY
GHVIVMVTSQVPHAMEILLAKLNRVCIFTVPKYLSYSEAAFESKDAYFKAIGYQEEDGNL
ESTDSYIARLTLHMKLYGALVQTEVDGFQNLHGIEEGWKWLARFLNALPANIYTAVALQA
FVELAGFGLYRRYKNQFKKLLNIISRDFLKALKEREDPKVTKVVMSLENYIQTNEFQKEP
EGWRLQDSLLSHGFVPNESDHQQQYHNNSSGYRGGYQQQQYNYNSSYSYRYQR
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgaccaggggaggtgtaaaattggaacttcgttgcccccaacgtgttggtggaatcgta
gctgatccacaaattgattggagttttgatgaactcctatcagagcttaatgccgtagat
cacagacttcaagcatcctcattggtctccttacctttcaccaaaacacattcaagtgat
ctttcagtagtaagtcatgctggaaaaaaccggaagtcctttgtgatgcatgtatcggat
gatgaaggtgactatgatgatgaggggaattatagcagacctctggccatgggtggtcgg
tttgcttgcgaggaagtatatttaagtgatgatgcagattctgataatgagtcaactact
ggagcccaatggtctttgatggacaaagggggagttattgaaggtgcattaattgagcta
agccatgaacaccagattactgttgcggaagatataagaacccgaatatctgcatttgga
actgatctcacaaatgaaaaagagaaacttaccaatgccctttcccgagctgaaaagagc
aaggaggcacgacgtgagttggatagaaaacgtgatttgcaatatcagcgcataattgca
gaagcacttgataatcatctgaccgacgttcaaaggcatcatgaatacaaatctcagata
gaagaaaaaaagataagagacgatgctgcaattgaagaggccaaaagaaagcaaaaggct
cttcaagaagaaaaagtgcgtcaagaaaaaatgaaagcagaagaggccaagcggcaagct
gaaaagaagagagatgaagaagcaaaagccgcagcattagaagctgaaagagctgcaaaa
gaagcagctgtggcagaaagtcagcgaaaagctgctgaagctatgactgcttcacaggga
gctgtttccaagggatctgattctggtggacccaaaaaaacacctgcaggaaacatactc
aagggtgccgagagtgctttaaaaatggaggagagaaggctacaaatgtacaaggaagtg
gttggaaaagatgtggcttctgaaatggattataataaggaatatcgtagtcatggaatg
caaatggctagacgtatcaaaaccataaccgggacaaaagagaatgtgagaacaaaagca
gatgaattggtgaaactcatgaattcaacatgtccccaatccgtcaatattgggattttt
gcagagaaagtcgtctcccaaagcacaaatgcaagcagcaacaatgtcctatatggttat
gggcatgtcattgttatggttacttcacaggttccccatgccatggaaattcttcttgcc
aaactaaacagagtttgcatcttcacagttccgaagtatttaagttactcagaggctgca
tttgaatctaaagatgcttacttcaaggctattggttaccaagaagaagatggaaatctt
gaaagtaccgatagttatatagcaaggttaactctacatatgaaactatacggggctcta
gttcagactgaagttgatggtttccaaaatttgcacggaattgaagaaggttggaaatgg
cttgccaggtttttaaatgctctcccagcgaatatttacactgcagttgcacttcaggca
ttcgttgagttggctgggttcggtttatatagaagatacaaaaaccagttcaagaagctg
ttaaacatcatatctcgtgacttcctcaaagcattaaaggagcgagaagatccaaaagtg
acgaaggtcgtgatgagtttagaaaactatattcaaacgaacgagttccaaaaggaaccc
gaagggtggcggctgcaagattctttgttatcacacgggttcgtcccaaatgaatccgac
catcaacaacagtatcataataactcatcgggataccgaggagggtaccaacaacaacaa
tataattataattcatcgtatagttatcgttaccaacgataa
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