Cynara cardunculus var. scolymus (artichoke): 112525748
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Entry
112525748 CDS
T05604
Name
(RefSeq) protein SDA1 homolog isoform X1
KO
K14856
protein SDA1
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccav03009
]
112525748
Ribosome biogenesis [BR:
ccav03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
112525748
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SDA1_HEAT
SDA1_C
BaxI_1
Motif
Other DBs
NCBI-GeneID:
112525748
NCBI-ProteinID:
XP_024991765
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All DBs
Position
LG 13:1281376..1288057
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AA seq
796 aa
AA seq
DB search
MPASEITADALSASGRTSEKLSLPTLQSKMKCDPEGYETELSLIYSQFKSSVELFQQQAA
LNFTSAASGGVGSDPTVAKDLGDRAMFLAHVTPFYPNQLLGYPKELVEFLRTSARVLPSS
LRVTVTQALILLLNRKIVAIKETLALFMELQVLSDKVLKELAFSHVIHSIRRMNQKHKNE
TENRALQSILFSMLQEEDEKKAMRSLVTICDLHRRKVWFDDRTANAICRACFHSSSRIMI
AALSFLLDYEKIEQDSDSDASSDEDEAVHQPHVVVSKEAIYKAKNTGTTSSKKKKKAKLQ
RVIRSMKKQQRISSERDNNSNYYSPLNSLKDAQGFAEKLFSRLQTCGERFEIKMMIVKVV
ARTVGLHRLILLNFYPFLQKYVQPHQRDVTNLLAAAVQACHDMVPPDAVEPLFKQIVNQF
VHDRSRTESIAVGLNVVREICLRIPLLMTEDLLQDLVLYKKSHEKAVSSAARSLISLFRE
ICPSLLIKKDRGRPTDPKAKPKAFGEVTVPNDVPGADLLRDEEEDDDDDDGSDGSDQDED
NSGIGEEDAISDDDISTHDGGSEFNSDDAAQMESEEDESSEDEGDDDSCSDNDNEEVKDI
DGMSIDSQGTRGQKRKFVDFDGELDAASQSLRALKRLAGPKLETDASDSTDGILSNEDFQ
RIKELKTKKDAKLALAHHGLLKKASDPKSTVFKIPTSDQLSLKRVDGVTLEANIRKKMTK
EERKALIKAGREDTGKYQARAAIKQNKTGGLSNRQKEHKKAMPLAAKRSKVERSRRQKKI
KQKTAGKQFRGRKAWK
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgccggcgtcggaaatcactgccgacgcgttatcggcgtccggccggacgtcggagaag
ctgagcctgcctacactccaatctaaaatgaaatgtgatcctgaaggttacgagactgag
ttatccctgatttacagccaattcaagtcttctgtcgaactttttcaacaacaagcagcg
ctgaatttcacttctgctgcaagcggcggtgttggaagcgaccctaccgtcgccaaagac
ctcggtgatcgcgccatgttcttggctcacgttactcctttttaccctaaccagctctta
ggttatccaaaagagctcgtggaattccttaggacatccgctcgtgtgcttccgtcctcg
cttcgtgtcactgttacacaagctctgattcttcttcttaaccggaagattgttgctatc
aaggagactcttgcattgttcatggagcttcaggtattgagtgacaaggttttgaaggaa
ttggcattctctcatgtcattcatagtatcaggcgaatgaatcagaaacacaagaatgaa
acagagaacagagctctgcaaagtattttattttcaatgctacaggaagaagatgaaaag
aaagcaatgagatcacttgtcacaatatgcgatcttcatcggaggaaggtttggtttgat
gatagaacagcgaatgctatatgtcgggcatgtttccattcatcatcaaggattatgatc
gctgctctatcatttcttcttgattatgaaaaaatcgagcaagacagcgacagtgatgcg
tcaagtgatgaagatgaagcagtccaccaacctcatgtggtcgtgagtaaagaggctatt
tataaggcgaaaaatacaggaacaacatccagcaaaaagaaaaagaaagcgaagttgcag
cgtgtaatccgtagcatgaaaaaacagcaacgtatatcatcagagcgtgataataactca
aactactattcaccactcaactctttgaaagatgctcagggatttgctgagaagctgttc
tcacgacttcaaacctgtggagaacggtttgagataaagatgatgattgtgaaagtagtt
gctcgtactgttggacttcatagattgatattattgaacttctatccttttcttcagaag
tatgttcagcctcaccaaagggacgtgacaaacttacttgcagcagctgtccaggcctgt
catgatatggtgccacctgatgcagttgaaccgttgttcaagcaaatagtcaatcaattt
gtgcatgatcgctctcgtacagagtcgattgctgttggattaaatgtggtgcgggaaata
tgtttacgcattcctctgttaatgacagaagacttgctgcaagaccttgtgctatataag
aaatcacatgagaaggcggtttcatctgctgctcgttcacttatttcattgtttagagag
atttgtccctcacttctaataaagaaggaccgtggacgacctactgatccaaaagcaaaa
ccaaaagcattcggtgaggttactgttcccaatgatgttcctggggctgatttacttagg
gacgaggaggaagacgatgacgatgatgatggcagtgatggttcagatcaagatgaggac
aacagtggtattggggaagaggatgccattagtgatgatgatatcagcactcatgatggg
ggttcggaatttaactctgatgatgctgcacaaatggaaagtgaagaggatgaatcatcg
gaagatgaaggtgatgatgattcatgcagtgacaatgataatgaggaggtgaaagacata
gatggaatgtccattgattctcagggaactagaggacagaagaggaaatttgtggacttt
gatggagaacttgacgctgccagccaaagtcttagggctcttaagaggttagcaggaccg
aaattggagacagatgcttcagattcaacagacggtattctctcaaatgaggacttccag
agaatcaaagagttaaagacaaagaaggatgcaaaacttgcattggcccatcacggattg
ttgaaaaaggcttccgatccaaagtcgacggtcttcaagatcccaacttctgatcaactc
agtttgaaaagagttgatggagttacacttgaagctaacatacggaaaaagatgaccaag
gaggaaaggaaggctttaatcaaagcaggaagagaagacacggggaagtaccaagcaaga
gctgctatcaagcagaacaagacgggtgggttaagcaaccggcaaaaggaacacaagaag
gctatgcctttggctgccaagagatcgaaggtcgaaagatctcgtcgtcagaaaaagatc
aagcagaagaccgctggcaaacagttccgtggtcgcaaagcctggaagtaa
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