Cynara cardunculus var. scolymus (artichoke): 112525781
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Entry
112525781 CDS
T05604
Name
(RefSeq) syntaxin-31
KO
K08490
syntaxin 5
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
112525781
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccav04131
]
112525781
Membrane trafficking [BR:
ccav04131
]
SNARE
Syntaxin (Qa)
Stx-cisGolgi
112525781
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNARE
Syntaxin
Syntaxin-5_N
ISG65-75
Syntaxin-18_N
Motif
Other DBs
NCBI-GeneID:
112525781
NCBI-ProteinID:
XP_024991816
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All DBs
Position
LG 13:complement(12398309..12403068)
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AA seq
348 aa
AA seq
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MVSAGASTYRDRTSEFRSLSDTLKKFGRISAANPDRTYQHNDPSTSSKLPLTPSSYRSEF
NKKASRIGLGIHETSKKIARLANLGKKSSIFDDPLKEIQELTALIKNDITALNVAVSDLQ
TLQNMEIADGDYSEDRVVHSTAVCDDLKNKLMGATKKFQDVLTARSENIKAHENRRQIFS
TNISRGNPLRQQTENVMEPPPWSSPSRSSANQPSESSGSGVQVGNQLRRRLAADTTPSQH
MEASMLQQQQVVPQQENYSQNRAVALQSVESTITELSGIFTNLATMVAHQGELAIRIDDN
MEETMSNVEGARGALLKHLNRISSNRWLLIKIFAILIFFLIIFLFFLA
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggtgtctgccggagcctccacctaccgggatcggacatcggagtttcgatctctatcc
gacacattgaagaaatttgggcgaatatctgctgccaatccagatcgaacatatcagcac
aacgatccatctacgtcttctaaactaccgctaactccttcttcatatcgatctgaattc
aacaagaaggcttctcgtattggattaggcatccatgaaacctccaagaaaattgccaga
ctcgccaatctgggtaaaaagtcatcgatctttgatgatcccttgaaggagattcaagaa
ttgacggccttgataaaaaatgatataacagccctaaatgtagctgtttctgatttgcaa
actcttcagaacatggaaattgctgatggtgattattcagaagacagagttgtccattct
actgctgtttgtgatgatttgaagaacaagctcatgggagctacaaagaagtttcaggat
gtattaacagcaaggagtgagaacatcaaggctcatgaaaataggagacaaatcttctct
acaaatatatcaagagggaacccgttaaggcagcaaacagagaatgtgatggagccacct
ccttggtcgagcccatctagatcatctgcaaatcaaccatctgaatcttcaggaagtgga
gttcaagtgggcaaccaactaagacgaaggttagctgctgatactactccttcccagcat
atggaagcgtccatgttgcagcagcagcaggtggttccgcaacaagagaactattctcaa
aatcgtgcagttgctctacagagtgttgagtctacaattacagaactgagtgggattttc
acaaatttggctacaatggttgctcaccagggggagttggctatcaggattgatgacaat
atggaagaaactatgtcgaatgttgaaggtgctcgtggagctcttttgaaacatttaaac
cgtatatcatcaaacaggtggctattaatcaaaatatttgctattttgatattctttctc
attatattcctatttttcctggcctag
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