Cynara cardunculus var. scolymus (artichoke): 112525879
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Entry
112525879 CDS
T05604
Name
(RefSeq) probable galacturonosyltransferase 10 isoform X1
KO
K13648
alpha-1,4-galacturonosyltransferase [EC:
2.4.1.43
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav00520
Amino sugar and nucleotide sugar metabolism
ccav01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
112525879
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ccav01003
]
112525879
Enzymes [BR:
ccav01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.43 polygalacturonate 4-alpha-galacturonosyltransferase
112525879
Glycosyltransferases [BR:
ccav01003
]
Polysaccharide
Structural polysaccharide
112525879
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_8
Glyco_transf_24
NV_polyhedrin
Motif
Other DBs
NCBI-GeneID:
112525879
NCBI-ProteinID:
XP_024991960
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All DBs
Position
LG 13:38477879..38481602
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AA seq
535 aa
AA seq
DB search
MRRTRPEFRRPVRRRWFPNVFWLTLCGFVVLVLIVFLTRESAKPASRSVLSKRTYRQVMT
MESLNVTDEMLNPDSITRQLTDQISLAKAYIVIAKESNNLQFAWELSTQIRNSQILLSNA
ALRRSPLTLGESNTAVREMAFLLFQAQQLHYDSATMIMRLKARIQELEEQTSSVTDKSSK
YGQIAAEEVPKSLYCLGVRLTTEWFNLSKLQQTVFEKTQSGIKLKDNSLYHFCIFSDNIL
ATSVVVNSTALNSQNPDRIVFHLVTDEVNFAAMKAWFTMNRFRQVTVDVQKFEDFSWLNA
SYVPVLKQLQDSDTKNYYFSGNNDGGKTPIKFRNPKYLSMLNHLRFYIPEVFPALNKLVF
LDDDVVVQKDLAGLFTVDLNGNVNGAVETCMETFHRYHKYLNYSHPLIRSHFDPDACGWA
FGMNVFDLVEWRKRNVTGIYHYWQEKNVDRTLWKLGTLPPGLLTFYGLTEPLDPNWHVLG
LGYTNVEEDVIENGAVLHFNGNLKPWLKIGMDKYKPFWEKYVDYSHPMLEQCNFR
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgagaagaacaaggccggagtttcgccggccagtgaggcggcggtggtttccgaatgtg
ttttggttgacattatgtggatttgtggttttggtgttgatcgttttcttaactcgagag
agcgccaaacctgcatccagatcggtgttatctaagagaacttacaggcaggtaatgacc
atggagagccttaatgttacagatgaaatgttaaatcctgactcaatcacacggcaactc
actgatcaaatatcactagctaaggcgtatattgtgatcgctaaagaaagcaacaacctt
caattcgcatgggaattgagcacacaaattcgcaactcccagatccttctttcaaatgct
gcattaaggcgatctccattaactcttggggaatcaaataccgctgttagagaaatggca
ttcttgctttttcaagcgcaacaactccattatgacagtgccacaatgatcatgagactt
aaagccagaatccaagagcttgaagaacaaacgagttccgttaccgataaaagtagcaaa
tacgggcaaatagctgccgaagaagtcccgaagagcttatactgtcttggtgtccgtttg
acaactgaatggttcaatctttcgaagttgcagcaaacagtattcgaaaagacccaaagc
ggaattaagctgaaagacaacagcctctatcatttctgcatcttttccgacaacattctt
gcaacttcggtcgtggtaaactcgacggcattaaactcacaaaacccagatcggatcgtg
ttccatcttgtaaccgatgaagtgaattttgcggcaatgaaggcttggttcacgatgaac
agatttcgccaagtgacggttgatgtgcagaagtttgaggatttcagctggctgaatgct
tcttacgttccggttctcaaacagctccaagattccgataccaaaaactattacttctcc
ggaaacaacgatggtgggaagactccgatcaagttccgaaacccgaaatatctatcgatg
ttgaaccatttacggttttacatcccagaagtttttccagcactcaacaagctcgtgttt
cttgacgatgatgttgtggttcaaaaggatctcgcgggtctatttaccgtcgatctgaac
ggaaacgtcaatggtgcagtggaaacatgtatggagacgtttcatcgataccacaaatac
ttgaactactctcacccgctcataagatcacattttgatcccgacgcctgtggttgggca
ttcgggatgaacgttttcgatttggtcgagtggcggaaacggaacgttacggggatttac
cattactggcaagaaaagaacgtggatcggacgttgtggaaactgggtacgttgccacca
ggacttcttacgttttacgggttaaccgaaccgctggacccaaactggcatgttcttggt
ttgggctacaccaatgtcgaagaggacgtgatagaaaatggagctgtgttacattttaat
gggaatttaaagccatggttgaagattggaatggataaatacaagcctttttgggagaaa
tatgttgattatagtcatcccatgttggagcaatgcaattttcgctga
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