Cynara cardunculus var. scolymus (artichoke): 112526039
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Entry
112526039 CDS
T05604
Name
(RefSeq) uncharacterized protein LOC112526039 isoform X1
KO
K22184
bromodomain-containing protein 9
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
112526039
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccav03036
]
112526039
Chromosome and associated proteins [BR:
ccav03036
]
Eukaryotic type
Chromatin remodeling factors
GBAF(ncBAF) complex
112526039
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
Motif
Other DBs
NCBI-GeneID:
112526039
NCBI-ProteinID:
XP_024992181
LinkDB
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Position
LG 13:8282908..8289297
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AA seq
612 aa
AA seq
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MGKVGGATTAKKKKGRPSLVDLKKRALEQQELENHQQSQRRSARRNPNSVAAVDDASVDE
DEYYEDDDDDERKEKKVKLVVRLPQLNQERHLSSDLVRSSSVNSVSGGSDSNADVDNRKI
NSGSGGIPNQHQGGKVPKAMDTLHASPLEAGPTTPLPDKKLLVFILDRLQKKDTHGVFSE
PVDPNELPDYHEIIDQPMDFGTVRSKLDKGLYSNLEELEADVYLICSNAMQYNPSDTVFF
RQARSIQELAKRDFENLRQEGDDGELQPKVVKRGRPPSKHLKKPPGRPPLDVVGPESTSG
ATLATAIDNPNESTPYNLRRGPMVYKHQADGSHPSHRSRNGEQHSELLSDWNEEFPAQIK
RADMKYGNKHFNIDETRRDTYKQFHPSNYGHNHSLLSNFGGERKQLVAVGLHAEHGYARS
LARFAANMGPVVWKIASKKIEKVLPPGVTFAPGVVGEPEPSPPPTSFFPSGNQSYTPRLA
SDDVLNKPEPPSTSGPKNVIAEAETSEPKIEVSALKANKLPPNHGRNGLNGANVSKMGMF
GLESDGQKATIGGEMGGNGGKASWQQVSSSNHRPPFTVPIPPDLNGSPPAPGSVGLRMGS
PSAQQPDLALQL
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaggtcggaggggcaacgacggcgaagaagaaaaaaggccgtccatcgctcgta
gatctcaaaaaacgagcactagagcaacaagaattggaaaatcaccaacagtcacaacgg
agatccgctcgccggaaccctaactccgtggctgctgtagatgatgcatctgttgatgaa
gatgagtactacgaagacgacgacgatgatgagaggaaagagaagaaagtcaagctcgtt
gttcgtttgccccaattgaatcaagaaagacatttgtcatcggatttagttcgatcttca
tcggttaattcggtgtctggtggttctgattcgaatgctgatgttgataatcgcaaaatt
aactccggatctggtggtattcccaatcagcatcaggggggaaaggttccgaaagcgatg
gacactctgcatgcatcaccattggaggccggacccacaacacctttgccagacaaaaag
ttgttggtgttcattcttgacagacttcaaaagaaggacactcatggggtattctccgag
ccggttgatcccaatgagctccctgattaccatgaaataatcgaccaacccatggatttt
ggcactgtcaggagcaaacttgacaagggactttattcgaatctggaagaactggaggca
gatgtgtacttgatatgttctaatgcgatgcagtataacccatccgatactgttttcttt
cggcaggcgagatctatacaagagttggcaaaaagggattttgagaacttgaggcaagag
ggtgacgatggtgagctgcaaccgaaggtagtgaaaagaggtaggcctccaagtaagcac
ctgaaaaagccacctggcagaccccctttggacgttgttggtcccgaatctacctcaggt
gccactctagcaactgctatagacaacccaaatgagtctactccttacaatttaagaaga
ggacccatggtgtataagcatcaggctgatggttcacatccatcgcatcgttctcgcaat
ggcgaacaacactctgaacttttatcagattggaatgaagagtttccagctcaaattaag
agggctgacatgaaatacggcaacaaacattttaatatagacgagaccaggcgtgataca
tacaagcagtttcatccttcaaactatggtcacaatcattctctgctatccaactttggc
ggggaaaggaagcagttagtagcggtaggacttcatgctgagcatggttatgctagaagc
ctagctcgatttgctgctaatatgggccctgttgtgtggaaaattgcttcgaaaaagatc
gagaaagttttacctcctggtgtgacgtttgctcctggtgtggttggtgaacccgaacct
tctcctccacctacgtcatttttcccatccgggaatcaaagttatacccccagattagcc
agcgacgatgttctaaacaaaccagaacccccatcaacttcaggtccaaagaatgttatt
gccgaggctgaaacgagtgaaccaaagattgaagtttctgcactaaaagccaataaactt
ccacccaaccatggtagaaatggtttgaatggtgcaaatgtttccaaaatgggaatgttt
ggtttagagtcggatggacagaaggcgacaattggtggtgaaatgggtggtaatggcgga
aaagcatcttggcagcaggtatcgtcatcgaaccatagaccaccgtttacagttccaatt
ccacctgatctaaatgggtcaccaccagcaccaggttctgttggactgaggatgggttca
ccttcagctcagcagccagatttagcattgcagctctga
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