Cynara cardunculus var. scolymus (artichoke): 112526496
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Entry
112526496 CDS
T05604
Name
(RefSeq) transcription initiation factor TFIID subunit 4b-like isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
112526496
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccav03021
]
112526496
03036 Chromosome and associated proteins [BR:
ccav03036
]
112526496
Transcription machinery [BR:
ccav03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
112526496
Coactivators
SAGA/TFTC/STAGA complex
112526496
Chromosome and associated proteins [BR:
ccav03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
112526496
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
RST
SPMIP10-like
Motif
Other DBs
NCBI-GeneID:
112526496
NCBI-ProteinID:
XP_024992556
LinkDB
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Position
LG_14
Genome browser
AA seq
907 aa
AA seq
DB search
MDPSMMKFLEEDEDETMHSGADVEAFTAALNRDIEGDNTSISQPPTGTDAGSALSQGTNH
TPSQLFQQWQSSSREGNASYSSQEEVKAQIQEQQSSAMEVNRQGSGSESQHLPNDTPREM
NHIPSEPSRPQDDLAQQQADQHNVHMSQTTNIQNADKNHGHRQEPNIARNPDNESQLQRM
HRMGNQQAMATGQAANTMNRPSGKQVPFALLLPVIEPQLDKDRAMQLQGLYVRLRNNNIN
KEEFVRHMRSLVGDHMLKMAVYKLQQGQALKMENASNQISNPAQLSAKHNIQKPSSYVPP
SSAHQSSDSSSLPMDSNAQKSRLLEHQSDSHGIQASHMSSNINAIKQDREQPFPLQGLGK
QQQQQQQHMHFPQSSFPTYGNTGGNYHPGSSANMNMSSQSFKQQSHDLQMRQGPVHPSMG
ASQAMSLPERQNAFSDIKRMHGGGLTHFTSNSGHWQPSMHKDQSLLSSMAYVKPEPVDQM
NDQQHKSQLSAQQGTSSFSPGQHEQGSAISGPSKDETFEMLSSRPNFSTSMSKPEAMSIT
AQLERQNVLQSAANSSLASGSNAKTPPKKPSVGQKKPLEAPVSSLSKKQKVSGAFSDQSI
EQLNDVTAVSGVNLREEEEQLFSGSKEDTRVSEASRKVVQEEEERLILQKTPLQKKLAEI
MAKCGIKNRSNDVERCLSLCVEERMRGLISNLIRLSKQRVDIEKPRHRTVITSDVRQQIM
SMNQKARDEWEKKQADAEKLQRADEPEGSAGIDGDDGRGKNSKVNKEEDDKMRTTAANVA
ARAAVGGDDMLSKWQLMAEQARQKREGGADAASTSQPSIDVGPKPVSTSERNFKDNPDME
RSSSAVTSTPGGPAARMKKSDFGESDAITIARSISVKDVISVLGREIQMSRSTLIYRLYE
RLRSDSE
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atggatccttctatgatgaagttcctcgaagaagacgaggacgaaacaatgcattcaggg
gcagacgttgaggcattcactgctgccctaaacagggatattgaaggggataatacttca
atatctcagcctcccactggtacagatgctggcagtgctttatctcaaggaaccaatcat
actccaagtcagttgtttcaacagtggcaatcatccagccgtgaaggcaatgctagttac
tctagccaagaggaagttaaggcacagatacaagagcagcaatcatctgcaatggaagta
aatcgacagggatctggttctgagagtcaacatctaccaaatgacaccccgcgtgaaatg
aatcacatcccatctgaaccgagcagaccccaagatgatttggcgcaacagcaagctgac
caacataatgttcacatgtctcaaaccactaatatccagaacgctgataagaatcacggc
catcgtcaagagccaaatatagcacggaacccagacaatgaatctcagttgcaaaggatg
catagaatgggtaatcagcaagcgatggcaacagggcaagcagctaatacaatgaatcgg
ccttcaggcaagcaagtgccatttgcactgttgctcccagttatagaaccacagcttgac
aaagacagggctatgcaactccagggtctctatgttcgattaaggaacaataacattaac
aaagaagaatttgtccggcacatgagaagtcttgtaggagatcatatgcttaagatggca
gtctataagttacaacaagggcaggcgctaaagatggagaatgcatctaaccaaatttct
aatcctgctcagctttctgctaaacacaatattcaaaagccatcttcatatgttccacct
tcctctgcccatcaatcatccgattcaagtagtttgccaatggatagtaatgctcaaaaa
tcacggttgttggaacaccaatcagattcacatggaatacaagcaagccatatgtcttct
aatattaatgctattaagcaagatagggagcagccctttccgttacagggacttggcaag
caacaacagcaacagcaacaacatatgcactttccacagtcgtcctttcctacttatgga
aatactggtggtaattatcacccaggttctagtgcaaatatgaatatgtcctcacagtct
tttaaacagcagagccatgatttacaaatgaggcaaggtccagttcatcctagcatggga
gcaagtcaggccatgagtttgccagagaggcaaaatgcatttagtgacataaaaagaatg
cacgggggaggtctcactcatttcacaagtaattcaggccactggcaaccatcaatgcat
aaagatcagagtcttctgtcatcaatggcctatgtaaaaccagaacctgtggatcagatg
aatgatcaacaacataaatcccagctgtcagcacaacaggggacatcttcattctctcca
ggacagcatgaacaagggagtgcaatttcagggccttcaaaagatgaaacttttgagatg
ctgtcttcaaggcccaatttctcaacgtcaatgagtaaaccagaggctatgtccatcaca
gcgcagctggaacgccagaatgtgttacagtctgctgcaaactcttcattggcatccgga
agtaatgcaaagactcctcccaaaaagccatccgttggccagaaaaaaccattggaagca
cctgtttcttcactaagtaagaagcaaaaagtgtctggagcattttcggatcaaagtatt
gagcaacttaacgatgtgactgctgtcagtggagtgaatctcagggaagaggaagaacaa
ctattctctgggtccaaggaagacactcgagtttcagaagcttcacgaaaggttgtccaa
gaagaagaagaaaggttgattttgcagaaaactccactccagaagaaattggctgaaatc
atggcaaaatgtggtataaagaacagaagcaatgatgtggaacggtgcttgtcactgtgt
gtagaagaaagaatgcgtggattaattagcaacctgatcagactttcaaaacagcgggtt
gacattgagaagccaagacaccggaccgtcatcacgtcagatgttcgacagcaaatcatg
tcaatgaatcaaaaagctcgggatgaatgggagaagaagcaggctgatgctgaaaaactc
caaagagctgatgagcctgaaggtagtgctggaattgacggtgatgatggtcgtgggaaa
aattctaaggtaaacaaagaggaagatgataagatgcgaacgacagctgccaatgttgct
gcgcgagcggccgtgggaggagatgacatgctctcgaaatggcaactaatggctgagcag
gctagacagaaacgtgaaggtggggctgatgcagcatctacttctcagccaagtatagat
gttggtcctaagcctgtgtcaacttctgagaggaattttaaagataatccagatatggag
aggagctctagtgctgtcacttctactcctggtggtccagcagcaaggatgaagaaatca
gatttcggggagagtgatgcgataacgatagcacgtagtatctcagtgaaggatgtgata
tctgttctgggaagggagattcagatgtcaagatccacgttaatataccgactctatgaa
agactacgttccgactctgaatag
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