Cynara cardunculus var. scolymus (artichoke): 112526576
Help
Entry
112526576 CDS
T05604
Name
(RefSeq) eukaryotic translation initiation factor 3 subunit B-like
KO
K03253
translation initiation factor 3 subunit B
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccav03019
]
112526576
03012 Translation factors [BR:
ccav03012
]
112526576
Messenger RNA biogenesis [BR:
ccav03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
112526576
Translation factors [BR:
ccav03012
]
Eukaryotic type
Initiation factors
eIF-3
112526576
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eIF2A
RRM_1
ANAPC4_WD40
IKI3
DPPIV_N
MRP-L20
Motif
Other DBs
NCBI-GeneID:
112526576
NCBI-ProteinID:
XP_024992687
LinkDB
All DBs
Position
LG 14:complement(9038420..9044873)
Genome browser
AA seq
711 aa
AA seq
DB search
MAEVMSMEDIRTEASRLDIDLSVVDWNSVWVPPGEDFGIKSDDEDLHEDNSLEFDAGFGN
VIVVDNLPVVPKEKFEKLEGVIRKIYSQIGVIKENGLWMPVEEDTGKTRGYCFIEYNTPQ
EAELAKEKTNGYKLDRAHIFAVNVFDEIEKFMRVPDEWAPPETKPYTSGENLQHWLTDEK
GRDQFVIRAGSDTEVLWNDARQVKTDPVYKRPFWTESFVQWSPLGTYLATVHRQGAAVWG
GASTFNRLMRYAHPQVKLIDFSPGEKYLVTYSSHEPSTPHDSHRVVLNVFDVRTGKVMRD
FKGSADEFAFGGTGGFTGVSWPVFRWGGGKEDKYFARLGKNVISVYETETFSLIDKKSIK
VENVMDFSWSPTDPIFALFVPEQGGGNQPARVSLFQIPSKEELRQKNLFSVSDCKMYWQS
DGEYLAVKVDRYTKTKKSTYTGFELFRIKERDIPIEVFELENKNDKIIAFAWEPKGHRFA
VIHGDNPKPDVSFYSMKGGKVSKLATLKQKQANALFWSPGGRFIILAGMKGFNGQLEFYN
VDELETMATAEHFMATDIEWDPTGRYVATSVTSVHEMENGFNIWSFNGKLLYRISKDHFF
QFLWRPRPPSFLSPEKEEEISKNLKKYSKKYDVQDQDISLLLSEQDREKRKQLKEEWERW
VNEWKTHHNQEKTERQILRDGEASDVEEEYEAKEVEVEELLDVSEVVVPDA
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagtgatgtcgatggaagatataagaaccgaggcctctcgtttggatatcgat
ttgtcggtagttgattggaactctgtttgggttcctccaggtgaagattttggtatcaaa
agtgatgacgaggatcttcatgaggacaattccttggaatttgatgctggttttgggaac
gttatagttgtggataatttgccggttgtgcccaaggagaaatttgagaagcttgaaggt
gtaatacgaaagatttacagccaaattggggtaatcaaggagaatgggctttggatgcct
gttgaggaagatactgggaaaactcgaggttactgcttcattgaatacaataccccacag
gaagctgagctagccaaggagaagacgaatgggtacaagctagacagagcacacatattt
gctgtcaacgtttttgatgaaattgagaagttcatgcgtgtcccagatgagtgggctcca
ccagaaactaaaccatacacatcaggggagaatctacaacactggcttactgatgagaaa
ggtagagatcagtttgttattcgtgctggatctgacacagaggtcctgtggaatgatgcg
agacaagtgaagactgatcctgtttacaaacgacctttctggactgaaagttttgtgcaa
tggtctcccttgggaacatacttagcaacggtacatcgacagggtgctgctgtttggggt
ggtgcttctacctttaatcgtctaatgcgctatgctcatccacaggttaaattgattgac
ttctctcctggtgagaagtatctggttacttacagcagccatgaaccaagcacccctcat
gatagtcatagagttgtgctcaatgtatttgatgttagaaccggcaaagtaatgagagat
tttaagggaagtgcagatgaatttgcatttggaggaaccggaggttttactggggtttct
tggcctgttttcagatggggtggtggaaaagaggacaaatactttgctcgacttggaaaa
aatgtcatttccgtctatgagactgagacctttagtcttattgataaaaaatccattaaa
gtcgaaaatgtgatggactttagttggtcccccactgatcctatttttgcactctttgtt
cctgaacaaggtggcggaaatcaacctgctagagtgagccttttccaaatcccaagcaaa
gaagagttaaggcagaagaatctcttcagcgttagtgattgcaaaatgtattggcaaagt
gatggggagtatcttgctgttaaagttgaccgatacacaaaaactaagaagagcacgtat
actggattcgagctttttcgtattaaagagcgtgacatacctatagaggtttttgagctt
gaaaacaagaacgacaagataattgcatttgcgtgggagccaaagggtcacaggtttgca
gttattcacggtgataacccgaagcccgatgtaagtttttactcaatgaagggaggtaaa
gtatcaaagcttgctacgctcaagcaaaaacaggcaaatgctcttttctggtcacctggt
ggccgctttattattttggctgggatgaagggcttcaatggccaattggaattttacaat
gtggatgagcttgaaactatggcaacagctgagcactttatggctacagatatagaatgg
gatcctactggaaggtatgttgcaacttcagtcacttcggtgcatgagatggaaaatggt
tttaacatatggtcattcaatggaaagctgctctaccgtatttcaaaggaccacttcttt
cagttcttgtggaggccaaggccgccatctttcttgagccccgagaaagaggaagaaatc
tcgaagaacctgaagaaatacagtaagaagtacgacgtacaagatcaagatatatcattg
ttgttaagcgagcaggaccgtgagaagaggaagcaattgaaggaggagtgggaaaggtgg
gtaaatgaatggaagacgcatcacaaccaagagaagacggagagacagatactgagagat
ggagaagccagtgacgttgaagaggaatacgaagccaaagaagtcgaagtcgaagaattg
ttggatgtttccgaagtcgtcgtccccgatgcctaa
DBGET
integrated database retrieval system
