Cynara cardunculus var. scolymus (artichoke): 112526584
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Entry
112526584 CDS
T05604
Name
(RefSeq) auxin response factor 6
KO
K14486
auxin response factor
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
112526584
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GFIT
Motif
Pfam:
Auxin_resp
B3
AUX_IAA
Motif
Other DBs
NCBI-GeneID:
112526584
NCBI-ProteinID:
XP_024992699
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Position
LG 14:3680178..3687030
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AA seq
876 aa
AA seq
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MKLSAVGFGQQLPEGEKRCLNSELWHACAGPLVSLPTVGSRVVYFPQGHSEQVAASTNKE
VDAHTPNYPSLPPQLVCQLHNVTMHADGETDEVYAQMTLQPLNSEEQKEAFLPADLGAPS
KQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFR
HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVL
SSDSMHLGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLARFVKAVYHTRVSVGMRFRM
LFETEESSVRRYMGTITGISDLDPARWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLT
TFPMYPSQFPLRLKRPWPPGLPSFNGIKEDDLGMNSPIMWLRGDPGDRGIQSLNFQGVGV
SPWLQPRLDASMLGMQTDIYQAMAAAALQEMRTMDSAKPSNPSLLQFQQHRTVPTGSATL
VPPQMMHQSQPQPTFENLPVSHPQPHLLPQQLQHQIPFNNEQQHLLPSMPQFGSSSQTIS
SMQHPSFSGSNGNPVSGSNVSSFQSLLGSFSHDETSHLLNMPRSTSLLTSTGWPAKRVAV
DPLLVSGASQSLLHQVEQLGPPSHTNLPRNTNLSQTAVSLPPFPGRECSIDQESSNDSQS
HLLFGVNIDNSNLLMQSGISNLRGVGNDSDSMTLPFTSSNYNMSNAGNEFSMNPTMTPSS
CIDESGFLHSPENTSQTNPPTRTFVKVYKSGCYGRSLDIAKFSSYHELRSELAQMFGLEG
QLEDPLRSGWQLVFVDRENDVLLLGDDPWPEFVSSVWCIKILSPQEVQQMGKQGLELLNS
VQIPNPTDSTYDNYTPSRQESMNLSNGVASVGSLEY
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgtctgctgttggttttggtcagcaattgcctgaaggggagaaaagatgtttg
aattccgaactttggcatgcttgtgccggtcctcttgtttccctccccaccgttggaagt
cgtgtcgtatacttcccacagggtcatagtgagcaggttgctgcatcaacaaacaaagaa
gtcgatgctcatactccgaactacccgagcttacctccgcaactcgtttgtcaacttcac
aatgtcactatgcatgcagatggggagaccgatgaggtttacgctcagatgacattgcaa
cccctgaattccgaagagcaaaaagaggccttccttccggcggatctcggtgccccgagc
aaacaacccacgaattatttttgtaaaacgttgacggcaagtgacacgagcactcacggt
ggattttcggttcctcgtcgtgcagccgagaaagtgtttcctccattggacttctcgcag
caacctccggctcaagaacttatcgcgagggatttacacgacaatgaatggaagtttagg
catatattccgtggacaaccgaaaaggcatcttctcacaaccggttggagcgtttttgtg
agcgcaaaaagacttgttgccggtgattcggtcttattcatatggaatgagaaaaaccaa
ttgctactaggaattcggcgtgctaatcgaccccaaaccgttatgccgtcttcggtttta
tctagtgacagcatgcacttggggcttcttgctgccgctgcacatgcggcagcaactaat
agccgtttcaccattttctataatccgagggcaagtccatcggaatttgtgatacctctg
gcgaggtttgttaaagcggtttatcatacacgagtttctgttggcatgcggtttcggatg
ttgtttgaaaccgaagaatcaagcgtccgtcgctatatgggcacgataacgggcatcagt
gacctcgatcccgctcgatggccaaactcacactggcggtccgtgaaggttggatgggac
gagtctacggccggagaaagacagccaagagtttcattgtgggagatcgaacccctaacg
acattcccgatgtacccttctcagttccccctccgactcaagcgaccatggccacccggg
ctcccctcttttaacggaataaaagaagatgatctgggaatgaactctccgataatgtgg
ctccgtggcgatcccggtgaccgtggaatccaatcactcaactttcagggagtcggtgtt
tcaccgtggctgcagccaaggctcgatgcaagcatgctcggaatgcaaaccgatatctac
caagctatggctgctgctgcccttcaagaaatgaggactatggattcggcgaaaccgtcg
aatccgtcacttctacaatttcaacaacaccgaactgtcccgactggttctgctaccctg
gtgccgcctcagatgatgcaccaatctcagcctcaaccaacgtttgaaaacctgccggtt
tcacatccgcagcctcatcttcttcctcaacaattgcaacaccaaattccgttcaataat
gaacaacaacatctactcccgtccatgccacagttcggttccagctcccaaacaatctct
tcgatgcaacatccgagcttttcgggttcgaacggaaaccccgtgtccggttctaacgta
tcgtcctttcagagtcttttaggttcgttttcacatgacgaaacttcgcaccttcttaac
atgccacggtccacctccttgttgacttccaccggttggccggcaaaacgtgtggccgtc
gatccgcttctcgtatccggagcatcacaatctcttcttcaccaagttgaacagttgggc
ccaccatcacacacaaacctccctcgaaacaccaatctctcccaaaccgccgtttctctg
ccaccgtttccaggaagagagtgctccatcgatcaagaatcgagcaacgattctcagagc
catcttttgttcggagttaacatcgataactcgaatctcttaatgcaaagtgggatctcg
aacctccggggtgtcgggaatgattccgattccatgactctgccattcacatcttccaat
tacaacatgagtaatgcaggcaacgagttttcgatgaatccaacgatgacaccttcgagt
tgtatcgatgagtcgggttttctgcattcacccgaaaacacgagccaaacgaacccacca
accagaaccttcgttaaggtttataagtcggggtgttatgggaggtcgctcgatatagca
aaatttagcagctaccacgagctgcgaagtgaacttgctcaaatgttcggccttgaaggc
caattggaagaccctttgagatcaggctggcagcttgtattcgttgaccgggagaatgat
gttcttctcctcggcgacgacccttggccggagttcgtgagcagcgtttggtgcatcaag
attctgtcgccacaggaggtgcagcaaatggggaaacaaggtctcgagcttctcaactcg
gtccagataccgaatcccaccgacagcacctacgataactacactccgagccggcaagaa
tcgatgaatctgagcaatggagttgcgtccgtgggttcgctcgaatactga
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