Cynara cardunculus var. scolymus (artichoke): 112526680
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Entry
112526680 CDS
T05604
Name
(RefSeq) DNA repair protein RAD51 homolog 3
KO
K10870
RAD51-like protein 2
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03440
Homologous recombination
ccav03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
112526680
03460 Fanconi anemia pathway
112526680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccav03400
]
112526680
DNA repair and recombination proteins [BR:
ccav03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecA family proteins
112526680
FA (Fanconi anemia) pathway
Other FA pathway factors
112526680
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rad51
ATPase
DnaB_C
AAA_25
RecA
AAA_24
Motif
Other DBs
NCBI-GeneID:
112526680
NCBI-ProteinID:
XP_024992828
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Position
LG 14:11403694..11423193
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AA seq
346 aa
AA seq
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MEVLRLPLSASQKGRLISAGYTSIASLSSISPSQLALELKISETEVLEILKIVSDGSRLE
SPGSSCTIVHGSQNAWDMLQEEKTLVRITTSCADLDDILGGGISCKEVTEIGGVPGIGKT
QLGIQLAVNVQIPSDYGGLGGKAIYIDTEGSFMVERALQIAEACSADMVEYSCLYRKGSQ
ACEVKRQPKDFLENIFYFRVCSYTEQIALVNYLEKFITEHKDVKVVIVDSVTFHFRQDFD
DMALRTRLLSGMALKLMKLARKFSVAVVLLNQVTTKYSDGSFHLALALGDSWSHASTNRI
ILHWNGNERYAYIDKSPSLKSASAPYSVTAKGIRNSASNNKRIKHT
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atggaggtgttgagattaccgttatctgcatcgcaaaaagggagactgatttcagcaggc
tatacttctattgcttcgctttcttcaatttctccttcccaacttgctctagaactgaag
atttcggaaactgaggtacttgaaattctaaagattgtatcagatggtagtaggttggag
agtcccggtagcagttgtactattgtccatggttcccagaatgcctgggatatgctgcag
gaagagaaaacccttgtacgtattaccacgtcatgtgcagatttggatgacattttgggt
ggaggaataagttgcaaagaagttactgaaattggtggagttccaggcattggtaaaact
caactgggaattcaacttgcagtaaatgttcagatcccatctgattatggtggacttgga
ggcaaagcaatttatattgataccgaaggcagcttcatggttgaacgtgctttacagatt
gcagaagcttgtagtgctgacatggtagaatacagttgcttgtacaggaaggggtctcaa
gcttgtgaagttaagaggcagcccaaagattttcttgagaatatattttacttccgagtc
tgcagttatactgagcaaattgcactggtcaattacttagagaagtttatcacagagcat
aaagatgttaaggtggttatcgttgatagcgtcacatttcacttccgtcaagattttgat
gacatggctcttagaactcgattactcagtggaatggctttaaagttgatgaaacttgcc
agaaaatttagtgtggcggttgttctactgaatcaggtgaccaccaagtattcagatggt
tcattccatttagcacttgcacttggtgatagttggtcgcatgcctccacaaatcggata
attttacattggaatggcaatgaacggtatgcatacatcgacaaatcaccctctctcaaa
tcagcatcggcaccatattctgtgacagccaaaggaatcaggaactccgcttcaaacaac
aaaagaataaaacatacgtaa
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