Cynara cardunculus var. scolymus (artichoke): 112526747
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Entry
112526747 CDS
T05604
Name
(RefSeq) cullin-4-like
KO
K10609
cullin 4
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03420
Nucleotide excision repair
ccav04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
112526747
09124 Replication and repair
03420 Nucleotide excision repair
112526747
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccav04121
]
112526747
03400 DNA repair and recombination proteins [BR:
ccav03400
]
112526747
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccav04147
]
112526747
Ubiquitin system [BR:
ccav04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
112526747
DNA repair and recombination proteins [BR:
ccav03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
112526747
TCR (transcription coupled repair) factors
Cul4-CSA complex
112526747
Exosome [BR:
ccav04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
112526747
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
Motif
Other DBs
NCBI-GeneID:
112526747
NCBI-ProteinID:
XP_024992925
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All DBs
Position
LG 14:complement(4623032..4645943)
Genome browser
AA seq
826 aa
AA seq
DB search
MSQSNTTTSNNNRKRSSATCTSPPPSTTTTGGGGAHFSGMKKAKSQAVSCSLDNKNGFQH
HQFDNNSSVDPSSMIEDPTENDAGRASSAGGFTANLSRKKATPPQPAKKLVIKLLKAKPT
LPTNFEENTWAILKSAISAIFLKQPDPCDLEKLYQAVNDLCLHKMGGSLYQRIERECEAH
ISAALQSLVGQSEDLVVFLSLVQKTWQDFCDQMLMIRGIALYLDRTYVKQTPTVRSLWDM
GLQLFRKHLSLASEVEHKTVFGLLKMIESERLGEAVDRTLLNHLLKMFTALGIYSESFEK
PFLECTSEFYAAEGVRYMQYSDVPDFLKHVEVRLHEEHDRCLLYLDASTRKPLVATAERQ
LLELHISAILDKGFMMLMDGNRTQDLRRMYTLFSRVNALESLRQALSSYIRKTGQGIVMD
EEKDKDMVFSLLEFKVSLDKIWEDSFSKNDVFCNTIKEAFEHLINLRQNRPAELIAKFLD
EKLRAGNKGTSEEELEGTLDKVLVLFRFIQGKDVFEAFYKKDLAKRLLLGKSASIDAEKS
MISKLKTECGSQFTNKLEGMFKDIELSKEINESFKQSSQARTKLPSGIEMSVHVLTTGYW
PTYPPMDVCLPHELNVYQDIFKEFYLSKYSGRRLMWQNSLGHCVLKAEFPKGKKELAVSL
FQTVVLMLFNDAQKLSFQDIKDATSIEDKELRRTLQSLACGKIRVLQKIPKGREVDDNDS
FMFNDGFTAPLYRIKVNAIQLKETVEENASTTERVFQDRQYQVDAAIVRIMKTRKVLSHT
LLITELFQQLKFPIKPVDLKKRIESLIDREYLERDKSNPQIYNYLA
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaatccaacactactacctccaacaacaaccgcaagcgctcatctgccacttgt
acatctccaccaccatccacgaccacaaccggcggcggaggagctcacttttcggggatg
aagaaggccaagtcacaggccgtctcttgctcattggacaacaaaaacggcttccaacat
caccaatttgataacaattcctctgtcgacccttcatccatgatcgaagatcccactgaa
aacgatgctggacgcgcctcctctgctggtggatttaccgccaatttgtcccgtaaaaaa
gcaacaccgcctcaacctgctaagaagctcgtaatcaagctacttaaagccaagccgacc
ttgccgacaaactttgaggagaatacatgggccatcttgaagtcagcgattagcgctata
ttcttgaagcagccagatccttgtgatttagagaagctttatcaagccgtcaatgatctt
tgcctccacaagatggggggaagtctttaccaacggattgagagggagtgtgaagctcac
atatctgctgctttacaatcattagttggccaaagtgaagatcttgtggttttcttatcg
cttgtgcagaaaacctggcaagatttttgtgaccaaatgttgatgatccgtggtatagca
ttgtatcttgaccgtacatatgtgaaacaaactccaactgtgcgatcgttatgggacatg
ggtcttcaacttttccggaagcatttatcactagcttcagaagttgagcacaaaaccgta
ttcggccttctgaaaatgatagagagtgagagattaggtgaagcagttgatagaacactc
cttaaccatcttctgaagatgttcactgccttgggaatttactccgagagttttgagaag
ccgttccttgaatgtacatcggagttctatgctgctgaaggagtaagatacatgcaatac
tcggatgttccagattttttgaaacatgtggaggtaagattgcatgaagaacatgacaga
tgcctactctatctcgatgccagtacaagaaaaccattggtagcaaccgctgaaaggcaa
ctccttgagcttcatatttctgcaatacttgataagggtttcatgatgttgatggatggt
aatcgaacccaagatcttcgaaggatgtatacactgttctctagagtaaatgccctcgag
tccttacgacaggcccttagctcatacatccggaaaacagggcagggaattgtaatggac
gaagagaaggacaaagatatggtgttctctctcttagaattcaaggtttctcttgataaa
atatgggaagatagcttttcaaagaatgatgtcttttgcaacacaatcaaagaggcattt
gagcatctcattaatctccgccagaaccgtcctgctgagttgattgcaaagtttttggat
gagaaactacgtgctgggaataagggtacatcggaggaagaattggagggcactcttgat
aaagtcttggttctgttcagatttatacagggtaaggatgtgtttgaagccttttataag
aaggatcttgcaaaaaggcttcttttgggaaagagtgcatctattgatgctgagaagtct
atgatctccaagttgaaaaccgaatgtggtagccagttcaccaacaagcttgaaggaatg
ttcaaggacatagagttatcgaaggagataaatgaatctttcaagcaatcatctcaagct
agaacgaaactcccttcaggaattgagatgagtgtccatgtcttaacaactgggtattgg
ccaacatatccaccaatggatgtctgccttccccatgaactgaatgtttatcaggatatt
tttaaagaattctatttgagcaaatatagtggtaggcggttgatgtggcaaaattcatta
ggtcactgtgtcttgaaagcagaattcccgaagggcaaaaaagaattggcagtttcctta
tttcagaccgtcgttctgatgctgttcaacgatgcacaaaagcttagttttcaagatatc
aaggatgccaccagcatcgaggacaaggagttgcggagaaccctgcagtcccttgcttgt
ggaaaaattcgtgtcctccaaaagattccgaaaggtagggaagtggatgacaatgattcc
ttcatgttcaatgatgggtttactgctcctctttatcgtataaaggttaacgctatccag
ttgaaggaaacggtggaagaaaacgcaagtactacagagagagttttccaagatcgtcaa
tatcaggttgatgctgctattgttcggattatgaaaactaggaaagttctgagtcacaca
cttctgataaccgaactctttcagcagctcaagtttccgataaaaccagttgacttgaag
aagaggatcgaaagcctgattgatcgggaatacctagagagagacaagagcaatcctcag
atatacaattacttagcttga
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