Cynara cardunculus var. scolymus (artichoke): 112526811
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Entry
112526811 CDS
T05604
Name
(RefSeq) abnormal spindle-like microcephaly-associated protein homolog
KO
K16743
abnormal spindle-like microcephaly-associated protein
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccav03036
]
112526811
Chromosome and associated proteins [BR:
ccav03036
]
Eukaryotic type
Centrosome formation proteins
Other centriole associated proteins
112526811
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IQ
CH
BrxL_N
CAMSAP_CH
Motif
Other DBs
NCBI-GeneID:
112526811
NCBI-ProteinID:
XP_024993000
LinkDB
All DBs
Position
LG 14:complement(199066..212750)
Genome browser
AA seq
1448 aa
AA seq
DB search
MEPKQQPQQHKQQIPSSPLPNSSSSSSLLLRDISNYKTPKPKRPFLINPSFDVESPCSQF
FTALKRTPKSSNSTVGRRPRCSFAAKKLKAIEIEQSISSRKTQTNKEKSLKSLAKSLTVW
LNFLFENPRSCGVEVSRFTGEDSSDGPSVVFLGAKRDSVSHGGVEVDREWRGPKRRKDTL
WVHKGEMENQFSSSIYSRLQASLGDVCSLDDMKERMTLYLSLTSCKEIFDVMTHVSKNID
EGRLKMKAHCPIVTDVGMKEKALKILMGYNPVWLRIGLYIIFGGESLLPNPNTDMDSEQE
VSFLKMVAEKLFFSHSGLAKAYIYNKLVDGLYRPGYYEKLGSVILKKFLLLALILDRAKS
QSSLPISYGVDGIDGGSPSLFTPRATIKSSSEVISDFLSSDVMHGVGNLLAHLMIIGYKV
SYQQNPLVKYVFKVADLFNDLQDGILLCRVIQLLQHDPSILKKVVVPSDDRKKNLVNCEI
SVQYLKQIGVPLCDEDGTEIIAEDIVNGDKELIISLLWNMFVHLQLPLLVNNKLVSEEIT
KIRGPAAVCQILPNTLSHLDMVLEWIKAICENYDLMVENFASLMDGKGMWCLLDYYFRKE
HCKDRSNKVCPLSIMSTSDYVDAVHNFLLSQKLTTLLGNFPEVLQVSDILEYKGACNERG
VIILLVFLSSQLTVKRNLQQINFHKLLGHGQKSDRKCIRRDRVLGNHEEQFTVDETCQHG
SRDKERNFKAIMSWWQEMAQHNSKANVKPVYTVLQRSTAKQSSDSQREKAAKIIQSHFRR
SVEHQNYTRIKKAVSFLQAFMRVWLMVKNTSAIGKLNMIKIQEPLYDGTKLSKRFSKYLV
DRHAFIKLRRSVVIIQRAMRYWTAQKCQTNIQMKAALRIQVAWRNHVNESIHNHRQSAAT
LIQTCYRCWLLRKSFLNQKQAAIKIQTCYRGYILRKSFLNKKQAITVVQSYYRGFLLRKS
FLDQKQAAIRIQTHYRGKILRKSFVNQKQAATKIQSHYRGWFSRNSFLNQKQAAARIQSL
YRGWFSRNSFLRMKQAVTKLQRLYRIRKSLRNFEHYKLEIKSAVTIQSHARGWIARRVAF
RHRCFIVLIQSFFRVWLTRREFVLQKEAAIKIQSAFRRFKCFKAFNCYTDATIVIQQSVR
GCIARKRLLGVSCLRQGARTGCNHDAPKDCFDNHELKTYAIIIQSGVRGWIARRKTAQKR
RTKSAIVIQSWVRGWIARKTMAQRRHRIVLIQSYWKGYIERKHSRGKLSDIRLRVQKSAA
NVDDGMRIINRLSAALLDLKNMKSVSGILHTCATLDMATKHSRKCCEKLVDAGAIDELLG
LIRSISRSIVDQQVLRHAISIFRNLTRYPHLTDVLIDTRGSGETILWEFIRNKEDTYYIA
ADLLRNICSNKKGVERLRNLHALVKRLYNLVEDLKRKAGNEKRNPRNLAMMDRRLKEAAQ
ILKLITNG
NT seq
4347 nt
NT seq
+upstream
nt +downstream
nt
atggaaccaaaacaacaaccccaacaacataaacagcaaatcccatcttccccattacca
aattcatcatcctcttcgtctttattacttcgcgacatttcgaattacaaaaccccaaaa
ccaaaacgcccatttctaataaaccctagtttcgatgtggaatccccttgttcccaattc
tttactgctcttaaacgaactcctaaatcatcaaactctaccgttggtcgccgccctcga
tgttcctttgctgctaaaaaacttaaggcgattgaaatcgagcaatcgatatcgtcaaga
aaaactcaaaccaacaaagagaagtcattgaagtcgttggctaagtctcttactgtttgg
ctcaatttcttatttgaaaaccccaggtcttgtggagttgaggtatcaagattcactggt
gaagattcatctgatgggccgtcggtggtgtttttgggtgcgaaaagggatagtgtgtca
cacggtggagttgaggttgatcgagaatggcgtgggccaaagcgtaggaaggatacattg
tgggttcataaaggtgaaatggagaaccagttctcgagttctatttattcgcgtttgcag
gcttctcttggggatgtttgtagcttggatgacatgaaagagagaatgacactttacttg
agcctcactagttgcaaggagatttttgatgtgatgactcatgtatcaaagaatattgac
gaaggaagactaaagatgaaagctcactgtccaatagttactgatgttggaatgaaagag
aaggccttgaagatcctaatgggttataaccctgtttggctaaggattgggctttacatc
atattcggtggtgaatctttgttgccaaatccaaacacagacatggattctgagcaagaa
gtttcttttctgaaaatggttgctgaaaaattgttcttttcgcattccggactagcaaaa
gcctacatttataataagttggttgatgggttatatagaccaggttactatgaaaaacta
ggcagtgttatattgaagaaatttttattgctagcccttatacttgatcgagctaaatct
cagagcagcctgcctattagttatggtgtagatggaattgatgggggttcaccttcttta
ttcacacctcgagctaccatcaaatcaagcagtgaagttatatcagatttcttatcatcg
gatgtcatgcatggagtcggtaatcttctagcacacctaatgattataggatacaaggtt
tcttaccaacagaatcctcttgtcaagtatgttttcaaggtggctgatctttttaacgat
cttcaagatggaattcttctttgtagagttattcaactcttgcaacatgacccctctatt
cttaagaaagtggttgttccatcagatgatagaaagaagaatttggtaaattgtgagatt
tctgtacaatatctgaagcaaattggagttccattatgtgatgaagatggaactgaaatt
attgcagaagatattgttaatggagataaggagctcataatctcattgctatggaacatg
tttgttcacttacagttgccacttttggtcaacaacaagcttgtatctgaggaaatcacc
aaaatccgtggacctgcagcggtatgtcagatacttccaaacaccttgagtcacttggat
atggttcttgagtggattaaggcaatttgtgaaaattatgatttgatggtcgagaacttt
gcatcattgatggatggtaaaggcatgtggtgcttgcttgattattatttccgaaaagaa
cattgcaaagataggtctaacaaggtatgtccattgtcgatcatgtcaacttcagattat
gtcgatgcagtgcacaactttttgttgtcacaaaagttgacgacgctgttagggaatttc
ccagaggttctgcaagttagtgatatacttgaatataaaggtgcatgcaatgagcgaggt
gtgatcattctgctggtttttctttcatcccaactaaccgtgaagagaaatttgcaacag
ataaattttcataaactcttgggtcatggtcaaaaatcagataggaaatgtatcaggcga
gatcgagtccttggaaatcatgaagagcaatttaccgtagatgaaacttgtcaacatggc
agcagagacaaggagagaaattttaaggctatcatgtcttggtggcaagaaatggctcag
cataacagcaaagctaatgtgaaaccggtttacacagttttacaaagatctaccgccaaa
caatcgagcgatagccaacgagaaaaggcggcaaaaatcatacaatcccatttcaggcga
tcagttgaacaccagaattatacacgaataaagaaggcagtttcttttctgcaagctttt
atgcgggtttggctaatggtgaagaacacatcagccataggaaaactcaatatgatcaag
attcaagaaccgttgtatgatggaacgaagctgtcgaaaagattttctaagtatttggtt
gatagacatgctttcattaagctcaggcgttctgtagttatcatccaacgtgccatgaga
tattggactgcccaaaaatgtcaaacaaatattcaaatgaaggcggcattaagaattcaa
gtggcttggagaaaccatgtaaatgaatccatccataatcatcggcaatcagcagcaact
ttaattcagacttgttatcgttgttggctattaaggaagagtttcttgaatcagaagcaa
gcagcaataaaaattcaaacttgttatcgtggatatatattgaggaagagtttcttgaat
aagaagcaagctataacagtagttcaaagttactatcgtggatttctattgaggaagagt
ttcttggatcagaagcaagcagccataagaattcaaacccattatcgtgggaagatattg
aggaaaagtttcgtaaatcagaagcaagcagcaacaaaaattcaaagtcattatcgtgga
tggttttcaagaaacagcttcttgaatcagaagcaagcagcggcaagaattcaaagtctt
tatcgtggatggttttcaagaaacagtttcttgagaatgaagcaagcagttacgaagcta
caaaggttgtatcggattagaaaaagtttgaggaactttgaacactacaaactcgaaatt
aagtcggcggttactattcagtcacatgcacgaggatggattgctcgcagggttgcattc
agacatagatgcttcatcgtgctgatccaaagctttttccgcgtttggttgacgagaagg
gagtttgtgttgcaaaaggaggctgcaataaagattcaaagtgctttccgacgttttaaa
tgcttcaaggctttcaattgttatacagatgctactattgtaatccagcaatccgtcagg
ggttgcattgctagaaagaggcttttaggggtctcatgtcttcgacaaggtgcaagaaca
ggctgcaaccatgatgctccaaaagattgcttcgataaccatgaacttaagacgtatgca
atcattatccaatcgggtgttcgtgggtggattgccaggagaaaaaccgctcagaaaaga
agaacaaaatcagcaatcgttattcaatcttgggttcgggggtggattgctaggaaaaca
atggctcagaggaggcatcggattgtgttgatccaatcgtactggaaagggtatatcgag
aggaaacattcaagaggaaagctatcggatatacggttgagggtgcaaaaatctgctgca
aatgtggacgacggcatgcgaattataaacaggcttagcgcggcgcttttggacctgaaa
aacatgaagagcgttagtggcattcttcatacttgtgcaacacttgatatggctacaaaa
cactctcggaaatgctgtgagaagctcgtggatgcaggggccatcgacgagctactcgga
ctaattcgttccattagtcgaagcattgttgatcaacaggttctacggcacgcaatttct
atttttcgaaacctcacgcgatatcctcatctgactgatgtcctcattgacactcgtgga
tctggtgaaacgattctttgggaattcatacgaaacaaagaagacacgtattatattgcg
gcggatcttctaagaaatatatgttccaacaagaaaggcgtcgaaagattacgcaatcta
cacgctttggtaaagagattgtataatcttgttgaagatcttaaaaggaaagcgggaaac
gagaagaggaatccacgaaatctagcgatgatggaccgaaggttaaaagaagccgctcaa
atcttgaaactaataacgaacggttaa
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