Cynara cardunculus var. scolymus (artichoke): 112527002
Help
Entry
112527002 CDS
T05604
Name
(RefSeq) probable starch synthase 4, chloroplastic/amyloplastic isoform X1
KO
K00703
starch synthase [EC:
2.4.1.21
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav00500
Starch and sucrose metabolism
ccav01100
Metabolic pathways
ccav01110
Biosynthesis of secondary metabolites
Module
ccav_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
112527002
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ccav01003
]
112527002
Enzymes [BR:
ccav01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.21 starch synthase (glycosyl-transferring)
112527002
Glycosyltransferases [BR:
ccav01003
]
Polysaccharide
Storage polysaccharide
112527002
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_transf_5
Glyco_transf_4
Glycos_transf_1
Glyco_trans_1_4
Glyco_trans_4_4
PKI
COG4_N
Motif
Other DBs
NCBI-GeneID:
112527002
NCBI-ProteinID:
XP_024993235
LinkDB
All DBs
Position
LG_14
Genome browser
AA seq
999 aa
AA seq
DB search
MVGKLSACFLSHGWSCCTVLDCKHFNVRYYSLPSPPLLTVSCKMRQRNSSLPPRRPQAKK
IVPAQLPQNDNLMPDVSGLSDSENADDISAFSQKSPSDDIVAIQRFDNKNSSSTLNPSIA
ADKVDDLSTINLQDVIGMIRNAEKNIHILNRARIHALDDLEKILSEKEALQREINRLQVR
LAETDAWIRVAAQDKIHVELLQHHLEELQTEMSNRNGTRNEMPDIVLRSPDRQTRALSEE
LNALRNENLSLKNDLETLKEQLSEVKRTDERVEVLEEERTILESSLKELEYKLTLSREDG
AQLSSLRSEYETLWDKVEHLQGLLDKSTSQADQAILVLQQNQELRKKVERLEESLEDANV
YKLSSEKLQQYNDLMQQKIKLLDERLERSDAEIHSYVQLYQDSVKEFQDTLDNLKEESKK
KATGKNVDMPWEFWSRLLLMIDGWFLEKKIHVDEAKLLRELAWKKDGRIHDVYMEYKEKN
EPEIIAAFRRLKSSSSGPGLHVIHIAAEMAPVAKVGGLGDVLSALSKALQKKGHLVEIIL
PKYDCMQYECIQDLRVLDLVVESYFDGRLYNNKIWVGTVEGLPVYFIEPHHPAKFFWRGK
TYGEPDDLKRFSFFSRAALELIHQASKKPDIIHCHDWQTAFVAPLYWDLYAPKGLNSARI
CFTCHNFEYQGTTTASEIASCGLDVHHLNRPDRMQDNSSPDRINPVKGAIVFSNIVTTVS
PTYAQEVRTSQGGQGLHATLNDHAQKFVGILNGIDTDAWNPATDSHLRFQYNADDLEGKA
ENKKALRRHLGLSFADSRRPLVGCITRLVPQKGVHLIRHAIYRALELGGQFVLLGSSPVP
SIHREFEEIANKFQNHEHIRLILKYDEALSHSIYAASDMFIIPSIFEPCGLTQMIAMRYG
AIPIVRKTGGLNDSVFDVDDDTIPVQLRNGFTFITPDEQGFNGAFDRAFNHYNSDSEGWQ
ELMHKVMNIDFSWDTSASQYEELYLQSVSRAKAARCAPG
NT seq
3000 nt
NT seq
+upstream
nt +downstream
nt
atggtggggaagctatcggcgtgctttctgagccatggatggagctgttgcacagtgctt
gactgcaagcatttcaatgtgcggtattactctttgccttctcctcccttgcttacagtt
tcctgcaagatgcgtcaacgtaactccagcttaccacctcggaggccacaagcaaagaaa
attgttcccgcacagcttccccaaaatgacaacctcatgccagatgttagtggacttagt
gattcagaaaatgctgatgacatctcagctttttctcagaagtctccctctgatgacatt
gtagcaattcagcgtttcgataacaagaattcaagcagcacactgaacccgtctattgct
gcagataaagtggatgatctctcaactattaatcttcaagatgtaatagggatgatacgt
aatgcagagaaaaatattcacatcctaaaccgagctcgtatccatgcacttgacgattta
gaaaagattcttagtgagaaagaggccttgcaaagagaaattaacaggttgcaggtgagg
ctggctgaaactgatgcgtggatcagagttgccgcacaagataagatacatgtggagcta
ttacaacaccatttagaggaacttcaaacggaaatgtctaacaggaatggaactcgtaat
gaaatgcctgatattgttctccgctctcctgatcgacaaacccgtgctctaagcgaggag
ctgaatgcattaaggaatgagaacctgtccctgaagaatgacctagagacacttaaggag
cagcttagtgaagtcaagagaacagatgaacgcgttgaagtgctggaggaagaacgcacc
attttggagtcttcgttaaaggagttggagtacaagcttactctttctcgggaagatggt
gcacaactttctagtttaagatcggaatatgagaccctatgggataaggtagagcatttg
caaggattacttgataagtcaactagtcaggcagatcaagctattttggtattacagcaa
aaccaggagctgcggaagaaggttgaaaggctggaagaatctcttgaagatgctaacgtt
tacaaattatcatcagaaaagctgcaacagtataatgatctaatgcaacagaaaataaag
ctgcttgatgaacgacttgaaaggtctgatgcggagatacattcgtatgtacagctatac
caagactcggtgaaggaatttcaagatacacttgataacttgaaagaagaaagtaagaaa
aaagcaacaggtaaaaatgtggatatgccctgggaattctggagtcgtttgttgcttatg
attgatggttggtttcttgaaaagaaaattcatgtggacgaggctaaactgctaagggaa
ctggcatggaagaaggatggacgtatccatgatgtttatatggaatacaaggaaaagaat
gagcctgaaattattgctgcttttcgcagattgaaatcttcatcatccggtccaggattg
catgtcattcatattgctgctgagatggcaccagttgcaaaggttggtggtctaggggat
gtgttgtctgctcttagtaaagcactacagaagaaaggacaccttgtggaaataattctt
ccaaaatatgattgcatgcagtatgaatgtattcaggatttaagggttttagatttagtg
gttgagtcgtattttgatggccgcttgtacaataataaaatttgggttggtacagttgaa
ggccttcctgtctactttatcgagcctcatcatcctgctaaatttttctggagggggaaa
acctatggagagcctgatgatctgaagcgcttctcattctttagcagggcagcacttgag
ctgattcatcaagctagcaaaaaaccagatattattcattgtcatgactggcagacagct
tttgtcgcacccctgtactgggatctatatgcacccaaaggactaaattcagctaggata
tgctttacatgtcataatttcgagtatcagggtactacaactgcttcagagatagcatct
tgtggtcttgacgttcaccaccttaacagaccagataggatgcaggacaactcatcacct
gacagaatcaatcctgttaagggtgcaatcgtgttctctaacattgtaacaacagtatca
ccaacctatgcacaagaggtgcggacttcacagggaggacaagggcttcatgcaaccctt
aatgatcatgctcaaaagtttgttgggattctgaatggaattgatactgatgcttggaat
cctgctactgacagccatcttagattccagtacaatgctgacgatcttgaggggaaagct
gagaataaaaaagctttaagaagacatcttgggctttcttttgctgatagtaggaggcca
ttggttggctgtataacaagattggtgccacagaagggtgtgcatctcatcaggcatgca
atatatcgggcattggagttgggaggacaatttgtattgcttggttcaagccctgtgcca
agtattcatagggaatttgaggagatcgcaaacaaatttcaaaatcatgagcatattcgg
ctgattttgaagtatgatgaggctctttcacattctatatatgcagcatcagacatgttc
atcattccatctatattcgagccttgtggcttaacacagatgatagccatgagatatggt
gcaatccccatcgttagaaagacagggggtctaaatgacagtgtttttgacgttgatgat
gataccattccagttcaattaagaaatggatttacatttataacaccggatgagcagggg
ttcaatggtgcttttgatcgagcctttaaccactacaacagtgatagcgaaggttggcaa
gagctaatgcacaaagtcatgaacatagacttcagttgggacacatcagcatcacagtac
gaagaactttatctacaatcagtatccagagcaaaggcagctcgttgtgcacctggctaa
DBGET
integrated database retrieval system
