Cynara cardunculus var. scolymus (artichoke): 112527038
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Entry
112527038 CDS
T05604
Name
(RefSeq) myosin-12-like isoform X1
KO
K10357
myosin V
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
112527038
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccav03019
]
112527038
04131 Membrane trafficking [BR:
ccav04131
]
112527038
03029 Mitochondrial biogenesis [BR:
ccav03029
]
112527038
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ccav04812
]
112527038
Messenger RNA biogenesis [BR:
ccav03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
112527038
mRNA cycle factors
P-body specific factors
112527038
Membrane trafficking [BR:
ccav04131
]
Others
Actin-binding proteins
Myosins
112527038
Mitochondrial biogenesis [BR:
ccav03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
112527038
Cytoskeleton proteins [BR:
ccav04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
112527038
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
KASH_CCD
Hpr_kinase_C
TSC22
AAA_22
AAA_16
nSTAND3
AAA_6
Motif
Other DBs
NCBI-GeneID:
112527038
NCBI-ProteinID:
XP_024993286
LinkDB
All DBs
Position
LG 14:complement(5971185..5983878)
Genome browser
AA seq
1445 aa
AA seq
DB search
MMEQYKGAPFGELSPHLFAIADDCYRAMINEHGSQSILVSGESGAGKTETTKMLMRYLAF
MGGRSGTEGRTVEQQVLESNPVLEAFGNAKTVKNNNSSRFGKFVEIQFDKQGKISGAAVR
TYLLERSRVCQVSDPERNYHCFYMLCAAPPEDAKKFKLGDPRTFHYLNQTNCYEVANIDD
GREYLETRNAMDVVGINQEEQDAIFRVVAAILHLGNVEFIKGKEFDSSQIKDDKSLYHLH
TAAELLMCDEKALQQSLCERVIVTPDGNITKPLDPASAALSRDALAKTVYSRLFDWIVDK
INNSIGQDPTAKSIIGVLDIYGFESFKINSFEQLCINLTNEKLQQHFNQHVFKMEQEEYT
KEEINWSYVEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKMYQTYNSHKRF
SKPKLSRTNFTINHYAGDVTYQADHFLDKNKDYVVAEHQALLNDSSCTFVANLFPPLEET
SKQSKFSSIGTRFKQQLQSLMETLSTTEPHYIRCVKPNTVLKPGIFENDNVLNQLRCGGV
LEAIRISCAGYPTKRTFDEFLERFGMLAPDVLDGSDEKSACVAICDRFGLKGYQIGKSKV
FLRAGQMAELDARRTEVLATAARRIQRQIRTYLTRKEFIILRRATINMQKHWRARLARKL
YDYLRKEAASIRIQKHTRGGAARISYKLLQGAAISIQTGFRAMAARDEYRRRRRNKAATI
VQTQWRRFYALSAYKHQKKASLTLQCLWRSKVARKELRMLKMAARDAGALREAKDKLEKR
VEELTWRLDFEKHLRVDLEEAKGQEITKLQNALQEMQGRLDEAHNQILHEKEEAKIAIEQ
APPVIKEVPVVDNTKVDELASHNHKLEDEILELKKRVEEFEQRYCDVENESKARLKELEE
SQVKISGLQDSIERLDANLSNLESENQVLRQQALVSSTNEELTEETEHLRSKIKELEWEN
ELLRNQKMVVEQITTPEKVLLQLQSLDNGHETKDNFETPNMEQEKTKESDNTVSFLTKQK
SLTDRQQENHDVLIKCLLEDKRFDKTRPVAACIVYKTLVQWRSFEAEKTHIFDRIIHTIR
SSIETQDKIKDLAYWLSTTSTLLFLLQSTIKASGSPYKSPHRNRASPTTLFGRMTQGFHA
SPMAMGISSGYSGMEGKPSAQCKIEAKYPALLFKQHLTACVEKLYGMIRDSLKKEISPFL
NSCIQAPRSTRVRPTRGATRNILSNIVAKQQASSIHWQSIVNSLDNTLHILSENYVPSII
TRKIFSQVFSFIDVQFFNSLLLRRECCSFSNGEYVKSGLHELEHWCKKATDQFSGSSWDE
LQHIRQAVGLLVSHQKTQKSMEEITNELCPVLSVPQIYRIGTMFWDDKYGTQGLSQEVIG
KMRSLMAEDSISMPNNSFLLDVDSSIPFSLEEISQSFHDIDLSDIDPPPLLRQRSDFHFL
LQQID
NT seq
4338 nt
NT seq
+upstream
nt +downstream
nt
atgatggagcagtataaaggggcacctttcggggagttaagcccacatctttttgccatt
gcagatgactgctacagggcaatgattaacgaacatggaagtcaatccatcttggtgagt
ggagagagtggagcaggtaaaacagagacaacaaaaatgttgatgagataccttgctttc
atgggaggcagatcaggtaccgaaggaagaacagttgaacaacaagttctggagtctaac
ccagttctggaagcctttgggaatgccaaaaccgtgaagaacaacaattccagtcgtttt
ggtaaattcgtagagattcaatttgataagcaaggaaagatttccggggctgcagttcgg
acttacctgcttgaaagatcacgcgtttgccaagtctctgacccagagaggaactaccat
tgtttttacatgctctgtgcagcaccccctgaggatgccaagaagttcaaattaggagac
ccaagaacgttccactatttgaaccaaactaattgctatgaagtagcaaacattgatgat
ggaagagagtatttggaaactcgaaatgctatggatgttgtgggaatcaaccaggaggag
caggatgcaatattccgtgtcgtagctgcaattcttcatcttggaaatgttgagttcatc
aagggaaaggaatttgattcttctcaaattaaagatgacaagtcactctaccatcttcat
acagcagcagagctactcatgtgtgatgagaaagcacttcaacaatcattatgtgagcgt
gttattgtaactcctgatgggaacatcacaaaaccgctagatccagcatcagctgccttg
agtcgtgatgccctggcaaaaacagtttactccagactttttgactggattgtagacaaa
ataaacaattcaattggtcaggatcctactgcaaaaagcataattggagtccttgatatc
tatggctttgaaagctttaaaatcaacagttttgagcagttatgcattaaccttactaat
gaaaagctgcaacagcattttaatcagcatgtattcaagatggagcaagaagaatacacg
aaggaggaaatcaactggagctacgtagaatttgtagacaaccaagatgttttagatcta
attgaaaagaaacctgggggtatcattgctcttcttgatgaagcatgcatgtttcccaag
tcaacacatgagacatttgctcagaagatgtaccagacatataactcacacaaaaggttt
agcaagccaaaactttcaagaacaaacttcacaatcaaccattatgcaggagatgttact
taccaagctgatcacttcctggacaagaacaaggattatgtcgtagcagaacatcaagct
ctattaaatgactcaagttgcacttttgtagcaaatctcttcccaccattagaagaaaca
tctaagcaatccaagttctcttccattggaactcggttcaagcaacaactacaatctcta
atggaaaccctgagcacaacagagccacattacatcagatgtgtgaagcctaatacagtt
ttgaagccaggaatatttgaaaatgacaatgttttgaatcaactaagatgtggaggtgta
ctagaagcaattaggataagctgtgctgggtatccaacaaaaagaacttttgacgaattc
ctggaacggttcggaatgttggctccagatgttctagatgggtctgatgagaagtcagca
tgtgtagcaatttgtgacagatttggattaaaggggtatcagatagggaaaagcaaggtt
ttccttagggccggacagatggctgaattagatgcacgaagaacagaagttctagcaaca
gcagcaagaagaattcagaggcaaatccgaacatatctcacacgtaaagaatttattatc
cttagaagggccacaatcaatatgcaaaagcactggagagcaagacttgcacgcaaactg
tatgactacttaaggaaggaagctgcatccatccgcatacaaaagcatactcgtggaggt
gcagcaagaatatcatacaagcttttacagggagctgcaatatctattcaaactgggttt
agagcaatggctgcacgggatgagtacagacgcagaagaaggaacaaggctgcaactata
gttcagactcaatggcggagattctatgctctttctgcatataagcatcagaagaaagca
agtcttacacttcaatgtctgtggagatcaaaggtagcaaggaaggaattaagaatgctg
aagatggctgcgcgagatgctggggcccttagagaagccaaggacaagctggagaagcgt
gttgaagagctaacatggagattagattttgaaaaacatttgagggttgatcttgaagaa
gcgaaggggcaagaaatcacaaagttgcagaatgctttgcaagaaatgcaaggaagactg
gatgaagcgcacaaccaaatccttcatgagaaagaagaggcaaaaatagcaattgaacaa
gcccctccagtcatcaaagaagtaccagttgtagacaacaccaaagtggacgaactggct
agtcataatcataaactggaggatgaaattctagagctgaagaagagagttgaagaattt
gagcagaggtactgtgacgttgaaaatgagagcaaggctagacttaaggagttagaggaa
tcacaagttaaaatttcaggccttcaggattccattgagaggttagacgcaaacttgtcc
aatctcgaatcagaaaatcaggttttgcgccagcaagcattggtttcttcaacaaacgag
gagctcactgaagaaactgaacacctcagaagcaagatcaaggaattagagtgggagaat
gaactcctccgtaaccaaaaaatggttgtggagcagataaccacccctgaaaaggtattg
ctgcaactacagagtttggataatggacatgaaacgaaggataactttgaaacaccaaat
atggagcaagaaaagacaaaggaatcggacaacactgtgtccttcctaacaaaacaaaaa
tcactaacggacaggcagcaggaaaatcacgatgttttgatcaagtgtcttctggaagat
aagcgatttgacaagaccagacctgttgctgcatgcattgtgtacaaaacattagttcag
tggagatcctttgaggcagagaaaacacatatatttgataggattattcacacaattaga
tcttccatagagactcaggataaaatcaaagatttagcatattggctatcaacaacttca
actcttttattcctactacaaagtacaatcaaggcaagtggttcaccctataagtctcca
catcgtaaccgcgcctcacccaccacattgtttggccgaatgacacaaggtttccatgca
tctcctatggccatgggtatctctagtgggtatagtggaatggaagggaagccaagtgca
caatgcaaaatagaggcaaagtatcctgcacttctgttcaagcaacatctaacagcctgt
gtggaaaaattgtatggaatgatccgtgatagcttgaagaaagagataagtccatttctg
aattcatgtatacaggcaccgagatctacaagggtcagaccaacaagaggggcaacaaga
aatattctttcaaatattgtggcaaaacaacaggcatcaagcatacattggcaaagcatt
gttaatagcttggataacaccttgcacattctgtctgaaaattatgtcccttcaatcatc
acaaggaaaattttcagtcaggtattctcattcatagatgtgcagttcttcaatagctta
ctgcttcggcgtgaatgctgctcttttagcaacggagaatatgtaaagtcaggtttgcat
gaacttgaacattggtgcaagaaagcaacagatcagttttctggatcatcatgggatgag
ttacaacacataaggcaagctgttgggttgctggtatcacaccaaaagactcaaaaatcc
atggaggagatcacaaatgaactctgcccggtactgagtgttccacaaatatatcgtatt
ggaactatgttttgggatgacaaatatggaactcaaggattatctcaagaggtaattggc
aagatgagatcactaatggcagaagattcaatcagcatgcccaacaattctttcttgctt
gatgtggattccagcataccattctctttggaagaaatatcccaatctttccatgatatc
gacttatctgatatcgatccaccacccctcctccgtcagagatcagattttcatttcctg
ctgcagcaaatagattga
DBGET
integrated database retrieval system
