Cynara cardunculus var. scolymus (artichoke): 112527125
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Entry
112527125 CDS
T05604
Name
(RefSeq) uncharacterized protein LOC112527125
KO
K01246
DNA-3-methyladenine glycosylase I [EC:
3.2.2.20
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
112527125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccav03400
]
112527125
Enzymes [BR:
ccav01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.20 DNA-3-methyladenine glycosylase I
112527125
DNA repair and recombination proteins [BR:
ccav03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
112527125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adenine_glyco
Motif
Other DBs
NCBI-GeneID:
112527125
NCBI-ProteinID:
XP_024993323
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All DBs
Position
LG_15
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AA seq
312 aa
AA seq
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MSKENVKKYVEKKQKPSSTHSLLSKRLKKVYPFELKKTTSLLSLSSPSSTLLRNTSESFT
ISSSTVDQAISSALGLISPDTPPTAKTSMPVLVAVPVPIPVLQPNLVSDASNESVKRCNW
ISKASEKLYVQFHDECWGVPVYDDNQLFELLSLSGMLMDYNWTEILRRKELFWEAFGGFE
PKFVAKMGEKEIIDIATNKDITLAESRVRSIVENAKCILKIAKQHGSFSGYMWGCMNYKP
TINRYKHPRNVPMRTPKAEAISKDLLKHGFRLVGPVIVYSFMQAAGMSIDHLVDCFRFDE
CVSLAERPWRHV
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaagaaaatgtgaagaaatatgtagagaagaagcaaaagccttcatcaactcat
agtctcttatctaaacgtctaaaaaaagtttacccttttgagctaaagaaaacgacctct
ctactctccctctcctcgccttcttcaacccttttgcgtaatacgagtgaatccttcacc
atttcatcttctacagtggatcaggccatttcgtcagcacttggtctcatttccccagac
actccaccaacggctaaaactagcatgccagttttagtcgcggttccagttccgattcca
gttctgcaaccgaatttggtttcagatgcttctaatgaaagtgtgaaaagatgcaactgg
atttctaaagctagtgaaaaactttatgttcaattccatgacgagtgctggggagttccg
gtgtatgatgacaaccaattgttcgagttgctttcgttgtcggggatgctaatggattac
aattggaccgaaattctaagacgaaaggaacttttttgggaagcttttggtggatttgaa
ccaaaatttgttgctaaaatgggagagaaggagattatagatatagccacaaacaaagac
ataacgttggctgaaagtcgagttagatccattgttgaaaatgccaaatgcatcttgaag
attgcaaaacaacatggatcattcagtggatacatgtggggatgcatgaactataaacca
accataaatagatacaaacacccaagaaatgtgccaatgaggacaccaaaagcagaagcc
atcagcaaggacttactgaagcatggattccgattggtgggtccagttatcgtttattcc
ttcatgcaggctgctggaatgagcattgaccatcttgttgactgctttaggtttgatgaa
tgtgttagccttgcagaaaggccatggaggcatgtctaa
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