KEGG T05604: 112527259

Cynara cardunculus var. scolymus (artichoke): 112527259

Entry

112527259         CDS       T05604

Name

(RefSeq) uncharacterized protein LOC112527259 isoform X1

K10801

methyl-CpG-binding domain protein 4 [EC:3.2.2.-]

Organism

ccav Cynara cardunculus var. scolymus (artichoke)

Pathway

ccav03410

Base excision repair

Brite

KEGG Orthology (KO) [BR:ccav00001]
09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    112527259
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ccav03036]
    112527259
   03400 DNA repair and recombination proteins [BR:ccav03400]
    112527259
Chromosome and associated proteins [BR:ccav03036]
Eukaryotic type
  Heterochromatin formation proteins
   MBPs (metylated DNA binding proteins)
    112527259
DNA repair and recombination proteins [BR:ccav03400]
Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     112527259

SSDB

Motif

Pfam:

HhH-GPD

Other DBs

NCBI-GeneID:

112527259

NCBI-ProteinID:

XP_024993544

LinkDB

Position

LG_15

AA seq 797 aa
MEMETKTHQQLPSFCSSFPNFGIQTPSTNHMYVIIALPANNNKISATSPFPSQIIDHVDR
KRKTQGHYEKKKKKKIHASTKQDEHLETEHKLVNIGQKEEMKGLVTCLNQHSYDNKTQLN
FKKEQHLGTENPLLHSGTLQHKDEIPNSVMKTITPYLNHDCNDIARKKTLQTNATKDKGP
LGTENTSEHLDIASVTDTKNGVPNNRGKDLKINDTVTPSIIQGSDANNNKTMTKTLIDAR
KEEVYLATGNNLQHFRKPYRKNEVPNKVEEKSKRIKGSEVKETIPPPNKKKKKTLQSSAK
KEDVHIGTNNGLQYYQHKDEIPNGVDEMTTPLNQSCNANRKKNKKKRIQFSATKQEDDNL
QYFREVKQEDKVSKKKNKKRKDLDDDNTTAFCLDKVAHNIPCIMSKHDLDDPFSQFVYKD
DDYHSISNKTGRGGTLCHSNSHVNEKISPSTLKVPPYFQKAVNEKEGSIVDQKMSHFTVK
VSPYFQKAVKLKEGAVGDPKMSPSTVKVLPSTVKVSPYFEKALKEKEDSVGSQNMPPSTV
KLSPYFQEVVKGKEASVGYQKMSTVKVSPYFQKALKEKEGSVGCFKKGRAKSKLLRTKAM
KEENEKTKKKSKKKDPSENLTAAQKRDEAYKKKTPDNTWKPPRSYHNLIQEDHFHDTWRV
VTICVLLNQTQGVQVKRVISDFFSLCPDAKTATEVPAEIMQKVIQPLGLQRKRTKIIQTL
SEQYIDDEWTHVTQLHGVGKYAADAYAIFCTGHWKRVRPKDHMLNRPSLSLYSLAFDAPH
KQYGPLDVSNRYVLLNL

NT seq 2394 nt +upstreamnt +downstreamnt
atggagatggagacgaagactcatcagcagcttccttccttttgctcctcttttcccaat
tttggtatccagacgccttcgacaaaccatatgtatgtcatcatcgctcttcctgccaac
aacaacaaaatcagcgctacttctccttttccttctcaaatcatcgatcatgtcgataga
aaaaggaagacgcagggacattatgagaagaaaaagaagaagaaaatacacgctagcacc
aaacaagatgagcatcttgaaactgaacataagttggtaaatattggccaaaaggaggag
atgaagggcttagttacttgtttgaatcagcattcctatgataacaaaacgcaacttaac
ttcaaaaaggaacaacatctgggtactgaaaaccctttacttcattctggtacgcttcaa
cacaaggatgaaattcctaatagcgtgatgaagacaattacaccttatttaaatcacgat
tgtaatgacattgcaaggaagaagacactacaaactaatgctacaaaagacaagggacct
ctgggaactgaaaacacttcagagcatcttgatattgcttctgtcacagacaccaaaaat
ggtgttcctaacaatagaggaaaggacttgaagattaatgatacagttactccctctata
attcagggttctgatgctaacaacaacaagaccatgacaaagacactaattgacgccaga
aaggaggaggtgtatctggcaactggtaacaacttacagcattttaggaaaccctaccga
aagaatgaagtacctaacaaggtggaggaaaaaagcaaaaggataaagggttcagaggtg
aaagagacaattcctcctcctaataagaagaaaaagaagactctacaatctagcgccaag
aaagaggacgtgcatattggaactaataatggtttacagtattatcaacataaggatgaa
attcctaacggagtcgatgagatgactactcctttaaatcagagttgtaatgctaacaga
aagaagaacaagaagaagagaatacaatttagtgccacaaagcaggaggatgacaattta
caatattttcgtgaagttaaacaagaagataaagtttctaaaaagaagaacaagaagagg
aaggatttagatgacgataataccactgctttctgcttggacaaggttgcacacaatatt
ccctgcattatgtctaaacatgatcttgatgatccattttctcaatttgtgtacaaggat
gatgattatcattcaatttcgaataagacaggcagaggaggtacactttgccattcaaac
tcacatgttaatgaaaagatttcaccttccaccttgaaggtgccaccctacttccagaag
gcagtgaacgaaaaagaaggatctattgttgatcaaaagatgtcacactttacggtgaag
gtgtcaccttacttccaaaaggcagtaaaattaaaagaaggcgctgttggtgatccgaag
atgtcaccctccactgtgaaggtgttaccctccactgtgaaggtgtcaccctactttgag
aaggcactgaaggaaaaggaagactctgttggcagtcaaaacatgccaccttctaccgtg
aaattgtcaccctactttcaagaggtggtaaaaggaaaagaagcttctgttggttatcag
aagatgtccaccgtgaaggtgtcaccttacttccaaaaggcactaaaagaaaaagaaggt
tctgttggatgcttcaagaaagggagagctaaatcaaaattactgcgaacgaaagctatg
aaagaagaaaacgaaaaaacaaagaaaaagagtaagaagaaagatccatcagaaaacctt
accgctgcacaaaagcgagatgaggcctacaagaagaagactccagataacacgtggaag
cctccacgatcttatcataacctcatccaggaggatcatttccatgatacctggagggtt
gtgactatatgtgtacttctaaatcaaacacagggtgtgcaggttaaacgggtgatatcg
gatttctttagcttatgcccagatgcaaagactgctacagaggttcctgcagagattatg
caaaaggttatacaaccacttggattacaaagaaaaaggacaaagataattcagacactg
tctgaacaatatatagatgacgaatggacacatgtgactcaactgcatggtgttgggaag
tatgcagcggatgcgtatgcaatattttgtacagggcattggaagcgtgtgagaccaaag
gatcatatgctgaatagaccatctctatctctctattctctggcgttcgatgctcctcac
aagcaatacgggccactggatgtttcgaataggtatgtattattgaatctttga

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