Cynara cardunculus var. scolymus (artichoke): 112527315
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Entry
112527315 CDS
T05604
Name
(RefSeq) ADP-ribosylation factor GTPase-activating protein AGD4-like isoform X1
KO
K12489
Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112527315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccav04131
]
112527315
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccav04147
]
112527315
Membrane trafficking [BR:
ccav04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
112527315
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
112527315
Exosome [BR:
ccav04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
112527315
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAR_3
ArfGap
BAR
Ank
Ank_2
PH
Ank_5
Ank_3
Ank_4
PH_11
ANK_LRRK2
BAR_2
PH_8
PH_20
PH_13
Resistin
Motif
Other DBs
NCBI-GeneID:
112527315
NCBI-ProteinID:
XP_024993659
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Position
LG 15:12969287..12984982
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AA seq
783 aa
AA seq
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MTAFIKLDDSPMFQKQVRYLEQTTDELKLRCQKLHKGSKKYMDGLGEACNMDYIFAESLE
AFGGGQDDPVSVSIGGPIMTKFVTAFREIETFKELLRSQVDHLLVDRLNQFLTNDLQDAK
ESRKRLDKASHVYDQAREKVASLKKSTRDEVVSELEEDLQNSKSTFERSRFNLVNSLMNI
EAKKKYTFLESLSAIMDAHLRYFKQGYELLSQMEPFIHQVLTYAQQSKEQASIEQDRLAK
RIQEFRTQAEMTEPVPSNFGTTTTYVSANGVGMSSDKNIEAIMQSTAKGLVQTIKQGYLL
KRSSSLRADWKRRFFVLDSRGNLYYHRILPNKPAGTQSYNSIANVEHHSRVFGRFRSRHS
RAASNDDEDLGCHTVDLRTSTIKLDAEDSDLRLCFRIISPLKTYTLQAENEADRIDWMNK
ITGVIASLLNTHLRQTHFDRSNMGNNSETVGDSSAVSRVDNKGSTADDMHINLADSVSTI
LREIPGNDLCAECSAPEPDWASLNLGILMCIECSAVHRNLGVHISKVRSINLDVKVWEPT
VMDLFGNLGNTYCNSIWENLLQSNSEDGSDPLAVNKPNPRDAIQQREKYIIAKYVEKRLV
CHEEMSASNPSYATRIWGAVKSNNIREVYRLIATSNANIVNTTYDEVAGADLFHNVHEHD
SSKDSVSAEKTDPFSCKKITDYSKPESCLEGCTLLHLACNSGYQVMLELLLQFGADINRS
DSHGRTPLHHCICSGNNKLAKYMLRRGAVASIKDGGGQGALERAMEMGAITDDELLILLS
ESK
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atgactgcttttatcaagctcgatgattctcccatgttccagaagcaggtgcgttatctt
gaacaaacaacggatgagctaaaactacgttgtcaaaaactacacaaggggagcaaaaag
tacatggatggtcttggagaagcatgcaatatggactatatatttgcagaatcattggag
gcatttggtggtggtcaagatgaccctgtcagtgtatctattggaggtccaataatgacg
aagtttgttactgcttttcgcgagattgaaacgtttaaggagcttcttcgttcccaagtt
gatcatttacttgtggatcgtttgaatcagtttttgaccaatgatctgcaagacgcaaag
gaatcacgcaaacgattggacaaagcttcacatgtgtatgatcaggctcgtgagaaggtt
gcatctttgaaaaagagtacacgggatgaagtagtttctgaattagaggaggacctgcag
aactcaaaatcaacatttgagaggagcagattcaatctagtaaattctctcatgaatata
gaagcgaaaaagaagtacacgtttttggaatctcttagtgcaataatggatgcccatttg
agatattttaagcagggatatgaactgttgagtcaaatggagcctttcattcatcaggtg
ttgacatatgcccaacaatcgaaggaacaagctagtattgaacaagatagacttgcaaag
agaattcaggaatttaggacacaagcggagatgacagaaccagtgcctagtaatttcggg
accactacaacttatgttagtgcaaatggtgtcggaatgagttctgataagaatatagaa
gcaataatgcagtccactgcaaaagggctggtccagaccatcaagcaagggtatcttcta
aaacgatcttcaagtttgagagcagattggaagagacgattctttgtacttgatagccgg
gggaacttgtattatcatcggattttgcccaacaaacctgcgggtacacaatcatacaat
tcaattgctaatgttgaacaccatagtcgtgtattcgggaggttccggtcaaggcatagc
agggcagcgtcgaatgatgatgaagacttgggctgtcatactgttgatcttcgtacttca
acaataaaactcgatgctgaggattcagatttgcgtctgtgcttcaggataatttcgccc
ttgaaaacatacacacttcaggctgaaaatgaagctgataggattgactggatgaacaag
atcacaggagtgattgcctcgctcttgaacacccaccttaggcagacacatttcgacaga
agtaatatgggtaataacagtgaaacagttggtgatagttccgctgtttcacgagtcgat
aacaagggatctacagcggatgatatgcatatcaatctggcagattctgtttctaccatt
cttcgagagattcccggaaacgatctttgtgcagaatgcagtgcacctgaacctgattgg
gcatcacttaatcttggcatattaatgtgcattgaatgctctgctgtacaccggaatcta
ggggttcacatatcaaaggtgagatcaataaatctagatgtgaaggtttgggaacctact
gttatggatttgtttgggaatttgggtaatacatactgcaattccatatgggagaatcta
cttcaaagtaatagtgaggatggatcagatcctcttgcagttaacaagcctaatcctaga
gatgcaattcaacagagggagaagtatatcatagcaaagtatgtggagaaacggctagtc
tgtcatgaagaaatgagcgctagtaacccttcatatgccaccagaatctggggagcagtc
aagagtaacaatatacgggaggtatatcgactaattgctacttcaaatgccaatattgtc
aacaccacatatgatgaggtggctggtgccgatttgtttcacaatgttcatgagcatgat
tcgtcaaaagattctgtttctgccgaaaaaacggatccattctcgtgtaaaaagattacg
gattatagcaagcctgaaagttgtcttgaaggctgtacattgttgcatctagcatgcaac
tctggctatcaagtgatgcttgaactattgctacaatttggtgctgatataaacaggtcc
gacagccatggtcggacaccgcttcaccattgtatctgctccggtaataacaaattggca
aagtatatgctcagaagaggggcggttgcatctataaaagacggtggcgggcagggtgct
ctagaaagagccatggagatgggggctattactgatgacgagttactaattttgctatcg
gagagcaagtga
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