Cynara cardunculus var. scolymus (artichoke): 112527321
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Entry
112527321 CDS
T05604
Name
(RefSeq) cellulose synthase-like protein D3
KO
K20924
cellulose synthase-like protein [EC:2.4.1.-]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ccav01003
]
112527321
Glycosyltransferases [BR:
ccav01003
]
Polysaccharide
Structural polysaccharide
112527321
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Cellulose_synt
zf-RING_4
Glyco_trans_2_3
zf-UDP
Glyco_tranf_2_3
Motif
Other DBs
NCBI-GeneID:
112527321
NCBI-ProteinID:
XP_024993669
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All DBs
Position
LG 15:complement(19961624..19966602)
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AA seq
1141 aa
AA seq
DB search
MSSRSPKALELQQGRGPIPPQVTFARRTSSGRYVNYSREDLDSEIGSAEFMNYTVHIPPT
PDNQPMDPSISQRVEEQYVSNSLFTGGFNSVTRAHLMDKVIDSETSHPQMAGAKGSSCKI
PGCDGMVMSDERGVDILPCECDFKICRDCYIDAVKTGDGICPGCKEPYKQTDLDQNSVDP
RQPLSLPSNIPSSKMERRTSSKMERRLSLMKSTKSALVRSQTGEFDHNRWLFETSGTYGY
GNAFWPKDDGLSNERTGVTGAEQLELLNKPWRPLTRKLKIPAAIISPYRLLALIRMVVLG
LFLHWRITHPNEDAIWLWFMSIVCEIWFAFSWLLDQLPKLAPVNRATDLNVLKEKFETPS
PQNPSGKSDLPGVDVFVSTADPDKEPPLVTANTILSILAADYPVDKLSCYVSDDGGALLT
FEAMAEAASFANLWVPFCRKHDIEPRNPESYFNLKRDPFKNKVRQDFVKDRRRVKREYDE
FKVRINGLPDSIRRRSDAYNAREEIKAMKLQKETAGDELLQPVKVPKATWMADATHWPGT
WMMASPEHAKGDHAGIIQVMLKPPSDEPLNGTDGEVNPLDFSEVDIRLPLLVYVSREKRP
GYDHNKKAGAMNALVRASAIMSNGPFMLNLDCDHYIYNSQAIREGMCFMMDRGGDRICYV
QFPQRFEGIDPSDRYANHNTVFFDGNMRALDGLQGPVYVGTGTLFRRTALYGFDPPRSKE
YHSGFCSCCFARRKKSSVASAPEENRAMRMGDSDEEDMSLSLFPKRFGNSSLLIDTIPIA
EFQGRPLADHPAVKNGRPPGALTIPRELLDASTVAEAISVISCWYEDKTEWGNRVGWIYG
SVTEDVVTGYRMHNRGWRSIYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSKNN
ALLASSKMKFLQRIAYLNVGIYPFTSIFLIVYCFLPALSLFSGQFIVQSLDVTFLAYLLA
ITLTLCMLAVLEIKWSGIELEEWWRNEQFWLIGGTSAHLAAVLQGLLKVVAGIEISFTLT
SKSGGDEDDEFADLYIIKWTSLMIPPIVIMMTNLIAIAVGVSRTIYSAIPQWSRLLGGVF
FSFWVLTHLYPFAKGLMGRRGRTPTIVFVWSGLIAITISLLWVAINPPAGANEIGGSFQF
P
NT seq
3426 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcaagatcacccaaagctttagaactacaacagggcaggggtccgattcctcca
caagtgacttttgctaggaggacctcttcaggtcgctatgtcaactattcaagagaagat
cttgatagtgaaattggcagtgctgagttcatgaactatacagtccacatacctcctaca
cctgataatcaacccatggatccttcgatatctcagagggttgaagagcaatatgtctcg
aattcactttttaccggcgggtttaacagtgtaacgcgtgcccacttgatggacaaagtg
attgattctgaaactagccatcctcagatggctggtgcaaaagggtcttcgtgtaaaatt
cctgggtgtgatggaatggttatgagcgatgaaaggggtgtggatatccttccttgtgaa
tgtgatttcaagatttgtcgagattgttacattgatgctgtgaaaactggtgatgggatc
tgcccaggatgtaaagagccttataagcaaacggatcttgatcagaacagtgtcgaccca
cgacagcctttatctctgccatcaaatattccaagttctaaaatggaaaggaggacgtcc
tcaaagatggagaggaggttgtctttgatgaagtcaaccaaatcggctttggttaggagc
caaacaggggaatttgatcataatcggtggttatttgagacaagtgggacttatggttat
ggcaacgcgttttggcctaaagatgatggattaagcaacgagagaactggggtaactgga
gctgaacagctagagcttctaaacaagccgtggcggcctcttactcgcaaactgaagata
cctgctgctattataagtccttatcggctcctagccttgattcggatggtggttcttgga
ttatttcttcattggagaatcactcaccccaatgaagatgcaatatggctctggtttatg
tcaattgtttgtgagatctggtttgcattctcttggctgcttgaccaacttcccaagctc
gcacccgttaatcgtgcaactgacctcaatgtactgaaagaaaagtttgaaaccccaagt
ccccaaaatccttcaggaaagtctgatcttcctggggtagatgtctttgtttctactgca
gatccagataaagaaccacctcttgttactgcaaacaccattttatctattcttgctgct
gattaccctgttgacaagctatcttgttatgtttctgatgatggtggtgctcttttaacc
ttcgaggccatggcagaagctgcaagttttgccaatttgtgggtccctttttgtcggaaa
catgatatcgagccaaggaatcccgagtcttatttcaatttgaaaagggatccttttaag
aacaaggtgagacaggactttgttaaggatcgcagacgagttaagcgtgagtacgatgag
tttaaggtccggattaatggtcttcctgattccattcgtcgtcggtctgatgcatataat
gccagagaagaaattaaagccatgaagcttcaaaaagagaccgctggtgatgaactcctg
caacctgtgaaggtccctaaagcaacatggatggcagatgcaactcattggcctggaacc
tggatgatggcttctccagaacatgcgaagggtgatcatgccggcatcatacaggtgatg
ctgaaaccaccgagtgatgaaccactaaatggcaccgatggtgaggtgaacccgcttgat
tttagcgaagttgatattcgacttcctcttctggtctatgtttctcgtgaaaaacgtccc
ggctatgatcataacaagaaggctggagccatgaatgcgcttgttagggcctcggctatc
atgtctaacgggccattcatgctcaatcttgattgtgatcattatatatacaactctcag
gctataagagaaggaatgtgctttatgatggaccgaggtggagaccggatctgttacgtg
cagttcccgcagaggttcgaagggatcgatccttctgatcgttacgccaatcacaacacg
gttttctttgatgggaacatgcgggcccttgatggtcttcaaggtccggtttatgttggt
actggaaccctctttcgtagaactgcgctttacgggtttgaccctcctcgatccaaagaa
taccattcgggattttgcagttgttgttttgctcgtcgtaagaaaagctcggtcgcatct
gcacctgaggaaaaccgagctatgagaatgggagactcagatgaggaggatatgagtctt
tctttgttccctaaaaggtttggcaattcgagtttactgatagatacgattccgatagca
gagttccaaggccggcctcttgctgatcacccggcggttaaaaatggtcggccgcccggt
gcacttacgattccgagagaacttcttgacgcatccactgttgctgaagcgatcagtgtg
atctcgtgttggtatgaagacaaaaccgaatggggaaatagagttggatggatttacgga
tccgtgactgaagatgtggtaacgggataccgtatgcacaacaggggatggcggtcgatt
tattgcgtgaccaagagagatgcttttcggggaaccgccccgatcaatctgaccgaccgc
ctccatcaggtgctccggtgggccactggttctgttgaaatctttttctcaaaaaacaac
gctcttttagctagttcgaagatgaagttcctccagaggatcgcatacctcaatgtcggg
atataccctttcacctccatcttcctcattgtttactgctttcttcccgctctttccctc
ttctccggccaattcatcgttcagagcctcgatgtcaccttcctcgcataccttcttgcc
atcaccttgacactatgcatgcttgctgttctcgagatcaaatggtccggtatcgagcta
gaagaatggtggagaaatgaacagttttggctcatcggcggcaccagtgcccatcttgct
gccgttcttcaaggtcttctgaaagtggttgccggaatagagatctcgttcactctaaca
tcaaaatccggcggtgacgaagatgatgaatttgccgacctttacatcatcaaatggaca
tctttgatgattccgccaattgtgatcatgatgacaaatctgattgcgatagcggttggg
gttagccgaacgatctacagcgcgataccgcagtggagccgactgttgggcggggtgttt
tttagcttctgggtgttgactcatttgtatccgttcgcgaaggggctgatgggacgaaga
gggaggacaccgacgattgttttcgtgtggtcggggctgatcgcgatcacgatttcgctt
ctttgggttgccatcaatccacctgctggtgcaaatgaaattggaggttctttccagttc
ccttga
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