Cynara cardunculus var. scolymus (artichoke): 112527387
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Entry
112527387 CDS
T05604
Name
(RefSeq) probable galacturonosyltransferase 3 isoform X1
KO
K13648
alpha-1,4-galacturonosyltransferase [EC:
2.4.1.43
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav00520
Amino sugar and nucleotide sugar metabolism
ccav01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
112527387
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ccav01003
]
112527387
Enzymes [BR:
ccav01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.43 polygalacturonate 4-alpha-galacturonosyltransferase
112527387
Glycosyltransferases [BR:
ccav01003
]
Polysaccharide
Structural polysaccharide
112527387
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_8
Glyco_transf_24
Motif
Other DBs
NCBI-GeneID:
112527387
NCBI-ProteinID:
XP_024993768
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All DBs
Position
LG 15:complement(9449168..9454814)
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AA seq
687 aa
AA seq
DB search
MKPPCRRLTLSLSRLVIVIFLVLIHIALVAADAFDTLTVQREIIEAWPLFDCPQCMDKKE
QLHTKSMAVGNHQIEKDIDIIVTYTDTSGAIRIRTVKSKDLSASWVWKNPINDKQAKDEG
SESLEDQHDTRVLDTNELSANEHADVNEQPLKTPFPMHPAKLRRRALRQERRDRRTAELI
QGGDKRETQMRSAAIERAKTFDTSVKAKYSIWRKEYESPNSDSTLKLMLDQIIMAKAYAS
IAKAKNATAIYDSLIKHSKRSQQAIGEATYDSELGPSAVDRAKEMGHILSLAKDQFYDCI
LMARKLRVMLQSTEANVEEVKKKSASLTQLAAKTVPRPLHCLPLVLTTDYFLLSDEKKKF
SNSRSLEDPSLYHYAIFSDNVLATSVVVNSTVLHAKEPGKHVFHIVTDKLNFAAMKMWFL
VNSPAGSTIQVQNVDDFTWLNSSYCPVLRQLESSRMKEYYFKAHQTSSLAAGSDNLKYRN
PKYLSMLNHLRFYLPEVYPKLDKILFLDDDIVVQKDLTPLWSVDLHGMVNGAVETCKESF
HRFDKYLNFSNPKISDNFDPDACGWAFGMNMFDLKEWKKRDITGIYHGWQNMNEERTLWK
LGTLPPGLITFYNLTHPLDRGWHVLGLGYDPALNQTEIENAAVVHYNGNYKPWLDLAISK
YKSYWSRYVIFDNPYLQLCNINTFMLS
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgaagcctccatgtagaagattaacactttctctatctcgtcttgttatagtcatcttt
ctggtgcttattcacattgccttagttgcagcagatgcatttgatactttaacagttcaa
agggaaattattgaagcctggccgttgtttgactgtccccagtgtatggataagaaggaa
caacttcacacaaaatctatggcagttggaaatcatcaaatcgagaaggatattgacata
atagtgacatacacagacacttctggtgccatacgaattaggacggtgaagtctaaagat
ttgtcggcttcatgggtctggaaaaaccccattaatgacaagcaagccaaagatgagggc
tcagagtcactagaagatcagcatgatacgagagttttggacaccaacgagctttctgcc
aatgaacatgcagatgtaaacgaacagccacttaaaacgccatttcccatgcatccagca
aagctcaggcgtcgggccttacgccaagaaaggagggatcgccggactgcagaattgatc
caaggtggtgacaagagagagactcagatgcgatcagctgccattgagcgtgctaaaact
tttgacaccagtgtcaaggctaaatacagtatttggagaaaagaatatgaaagcccaaat
tctgattctaccttgaaacttatgcttgaccagatcataatggcaaaagcatatgcaagt
attgcaaaagccaaaaatgcaactgctatctatgattctctaattaaacattctaaaaga
agtcagcaagcaattggggaagcaacttatgatagtgaacttgggcccagtgcagttgat
cgggctaaagaaatgggtcatattttgtccttagcaaaggaccaattttatgattgtatc
ttgatggcgagaaaattaagggttatgcttcagtccacagaagcaaatgttgaggaagtg
aagaaaaagagtgcatccttaacacaactggctgccaaaactgtacctaggcctttgcat
tgccttcccctggtgctcacgaccgattatttcttgctgagtgatgaaaaaaagaagttt
tctaacagcaggagtcttgaggatccttctctataccactatgctatattttctgataat
gttctagcaacatctgtagttgtgaattcgacagtcctacatgcaaaggagcccggaaag
cacgtgttccatatcgttacagacaaattgaactttgcagccatgaagatgtggtttctc
gtcaactctcctgcaggttccacgatccaagttcaaaatgtggatgatttcacttggctc
aattcttcttattgtcctgttcttcgtcagcttgaatcatctcgaatgaaagaatattac
tttaaggcacatcaaacatcatctttagcagctggatccgacaatcttaaatataggaac
ccgaaatacttatcgatgctgaatcatttgaggttctaccttcctgaagtatatccaaag
ctggataaaatattgtttctcgatgatgatattgtagttcaaaaggatctgacacctttg
tggagtgttgatctgcatgggatggtaaatggtgctgtagagacctgcaaggagagtttc
catcggtttgataagtacctgaacttctctaacccaaagatttctgataactttgatcca
gatgcatgtggttgggcattcggcatgaatatgtttgatttgaaggagtggaagaaacgc
gacattactggaatatatcatggctggcaaaatatgaacgaggaaagaacgctatggaag
cttggaacactgcctcccggattgataacattctataacctgacccatccactggaccga
ggttggcatgtattaggacttgggtacgatccagcccttaaccaaactgaaatagaaaat
gcagcggtcgtacattacaatgggaactacaaaccctggttagatcttgcaatcagcaag
tacaaatcatattggtcaaggtatgtcatatttgataatccatatcttcaactttgtaac
attaacaccttcatgttatcataa
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