Cynara cardunculus var. scolymus (artichoke): 112527445
Help
Entry
112527445 CDS
T05604
Name
(RefSeq) probable acyl-CoA dehydrogenase IBR3 isoform X1
KO
K00249
acyl-CoA dehydrogenase [EC:
1.3.8.7
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav00071
Fatty acid degradation
ccav00280
Valine, leucine and isoleucine degradation
ccav01100
Metabolic pathways
ccav01110
Biosynthesis of secondary metabolites
ccav01212
Fatty acid metabolism
Module
ccav_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
ccav_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09100 Metabolism
09103 Lipid metabolism
00071 Fatty acid degradation
112527445
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
112527445
Enzymes [BR:
ccav01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.8 With a flavin as acceptor
1.3.8.7 medium-chain acyl-CoA dehydrogenase
112527445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
APH
Acyl-CoA_dh_1
Acyl-CoA_dh_M
Acyl-CoA_dh_N
Acyl-CoA_dh_2
Kdo
Fructosamin_kin
EcKL
OST_IS
Motif
Other DBs
NCBI-GeneID:
112527445
NCBI-ProteinID:
XP_024993880
LinkDB
All DBs
Position
LG 15:21003231..21013658
Genome browser
AA seq
829 aa
AA seq
DB search
MARYTGELVGKVNSAHQFDNEALFRYCSIHVEGFPRSSSKFSVSQFGYGQSNPTYLIEMQ
SGTVVKRYVMRKKPSGILLQSAHAVEREFQVLHALGTHTLVPVPRVFCLCTDSSVIGTPF
YVMEFLEGRIFLDPMLPGVAPNRRQALYHATAKALASLHSADVDAIGLGGYGRRNNYCKR
QVERWARQYIDSTGEGKSERNPKMLKLIAWLRQNIPSEDSAGSSAGLVHGDFRIDNLVFH
PIEDRVIGILDWELSTLGNQMCDVAYNCLLYIGDISQDKVKHNEGFEITDAPEGVPSLEE
YLMDYCTAAGRPWPVAGWKFYVAFSLFRGASILAGVHSRYIMGNASGGKRAQDAGEKAND
LIQIAWSYIQRETVLSQNPPSDIRGKDHVYGIANEKKDQGLEEGGRFIPNKKVKELREKL
IKFIEERIYPMEPEFSKLAQSSMRWTVHPEEEKLKEIAKQEGLWNLFIPFDSAARAREIL
FNGRDDNVIGTGFPNQLGAGLSNLEYGYLCEIMGRSVWAPQVFNCGAPDTGNMEVLLRYG
NKEQLQEWLIPLLSGTIRSGFAMTEPQVASSDATNIECSIRREGDTYVINGKKWWTSGAM
DPRCKLLILMGKTDLNVPIHKQQSMILIDINTPGVKILRPLTVFGFEDAPHGHAEISFEN
VRVPAKNILLGEGRGFEIAQGRLGPGRLHHCMRLIGAAERGMQLMVQRALQRRTFGKLIA
QHGSFVSDVAKCRIELERTRLLVFEAADQLDKHGNKKARGALAMAKVATPNMALMVLDTA
MQVHGAAGVSGDTVLSHLWATARTLRIADGPDEVHLGTIAKLELKRAKL
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atggctcggtatacaggtgagcttgtgggaaaagtgaattcagcacatcaatttgacaac
gaggccttgtttcgttattgttctattcatgtcgaaggcttccctcgttcttcatccaaa
ttttccgtttctcagtttgggtatgggcaatcaaatcccacatatcttatagaaatgcag
tcaggcactgtggtgaagaggtatgtaatgagaaagaagccctctgggattctgctccaa
tctgctcatgccgttgagagagaatttcaggtgcttcatgcattgggtactcatacgctt
gttcctgtccccagagtcttctgtttatgtaccgactcaagtgtaattggaactccattc
tacgttatggaatttttggaggggcgcatattcttagaccctatgctacctggtgtggca
cctaataggaggcaagctttataccatgcaactgctaaagctttggcttctcttcattct
gctgatgttgatgcaattggtctgggaggctatgggcgacggaacaactactgtaaacgc
caggtggaaaggtgggcgagacaatatattgattctactggtgaaggaaaatccgagaga
aacccaaaaatgttaaagctgattgcttggttgcgtcagaatattccttcagaagattct
gctggaagttcagcagggctagtccatggtgattttcggattgataatctagttttccat
cctattgaggatagagtgattggcattcttgattgggagttgtccactcttggaaatcag
atgtgtgatgttgcatacaactgtctgttgtacattggagatatctcacaggataaagtg
aaacataatgaaggttttgaaattactgatgctcctgaaggagttccttcattggaagaa
tatctgatggactactgcactgctgctggaagaccatggcctgttgctggatggaagttt
tatgttgccttttcgcttttccgtggtgcatcaatcttagcaggtgtccacagtagatat
attatgggtaatgcatcaggtggaaagcgtgctcaagatgctggggaaaaagccaatgat
cttatacaaattgcttggtcttatattcaaagggaaactgttctatcacaaaatcctcca
tctgatataagaggaaaagatcatgtatatggtattgcaaatgaaaagaaagatcaaggg
ttggaagagggagggagatttattcctaacaaaaaagtaaaggagctgagagaaaaacta
atcaagttcattgaggaacgtatatatccaatggagcctgagttcagcaagcttgctcag
tcttccatgcgttggacggttcacccagaagaggaaaagttgaaggagatcgcaaagcaa
gaaggcctatggaacctttttataccttttgatagtgccgcaagggcaagagaaattctt
ttcaatgggagagatgataatgtcattggaacgggttttcctaaccaattgggcgctgga
ctctcaaatcttgagtatggatacctttgtgagatcatgggtcgttctgtgtgggctcca
caagttttcaactgtggggcacctgataccggaaatatggaggtattgttgcgctatggc
aacaaagaacaacttcaagaatggcttattccattgcttagtggaacaatccggtctgga
tttgcaatgacagaacctcaagttgcatcttctgatgcgacgaatatagagtgttctata
agaagagaaggtgatacatatgttataaatggaaagaagtggtggacaagtggagccatg
gatcctagatgcaaactccttatacttatggggaaaacggacttaaatgtgccaattcat
aagcagcaatccatgattctcatagatatcaatactcctggtgtgaaaatactaagacct
ctcacggtatttggctttgaggatgcacctcatggacatgcagagatttcatttgagaat
gtccgtgttccagctaagaatatcctgttgggggagggccgtggctttgagattgcacag
ggtaggttgggtccagggaggttgcatcactgcatgagattaataggtgcagcagaacgt
gggatgcagttgatggttcagagggctcttcaaagaagaacatttggaaaattaatagct
cagcatggctcctttgtttctgatgtggccaagtgtcggatagagctagagagaaccaga
ctattggtttttgaagctgcagatcaacttgataagcatggaaacaagaaagctcgtggt
gcccttgcgatggccaaggttgcaactccaaatatggcattgatggtgcttgacacggca
atgcaagtgcacggtgcggcgggcgtatcgggagacactgttttgtcccatctttgggct
acggctaggactctcagaatcgcagatggtccagacgaagttcatttggggaccattgcc
aaattagagttgaagagagctaagctttga
DBGET
integrated database retrieval system
