Cynara cardunculus var. scolymus (artichoke): 112527555
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Entry
112527555 CDS
T05604
Name
(RefSeq) (E)-beta-farnesene synthase-like
KO
K15803
(-)-germacrene D synthase [EC:
4.2.3.75
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav00909
Sesquiterpenoid and triterpenoid biosynthesis
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
112527555
Enzymes [BR:
ccav01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.3 Acting on phosphates
4.2.3.75 (-)-germacrene D synthase
112527555
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Motif
Pfam:
Terpene_synth_C
Terpene_syn_C_2
Terpene_synth
Anti-adapt_IraP
Motif
Other DBs
NCBI-GeneID:
112527555
NCBI-ProteinID:
XP_024994027
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Position
LG_15
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AA seq
607 aa
AA seq
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MNSTVPVSYRSSAIDHNECKQGVIRSTVNFHRSIWGDQFLTYNEREDQDWEEEQAKELIE
KVRKELVITTLTEPMQHVKLMELIDAVQRLGVAYHFELEIEESLNHIYVTYGDQWIDDNL
QSTSLWFRLLRQHGFNVVSGVFRKYMDNNGNFLESLRNDVEGMLSLYEAAYLRVKGEEVL
DAAIEFTTFELENIAKDHVGNDDYLKIQIQQALQQPLQKRLPRLEALRYIPVYQHESSHN
EDLLKLAKLDFNLLQSLHRKELNQISKWWKNLDTPTKLPYVRDRLVEGYFWILAAYYEPQ
YSDARIFLMKTCNLVIILDDTYDNYGTYEELEIFTEAVQRWSISCLDKLPEYMKFIYQEL
LDVHKEAEELLEKKGMAYRSYYTKEMVKEYTRNLLTEAKWVKEGYIPTMEEHMSVTLVTC
AYAMIIAKCYVHGHDLVTEDTFKWVSTYPPLVKASCLILRLMDDIATHKEEQERKHVASS
IQCYMKQHGVSEEETREIFSKQVEDAWKVINQESLRPTAVPMPLLMPPINLARVCDVLYK
HGDNYNHAGKEMIHYIKSLLVNPINEATFPANIVAGNIDAGDFLSGGFTGGFSFFRRIQA
YGKFSPV
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgaactctacagttcctgtttcttaccgttcttcggccatcgatcataatgagtgtaaa
caaggggtcatccgcagcacggtgaacttccatcgtagcatttggggagatcagtttctt
acctacaatgagagagaggatcaagactgggaggaggaacaagcaaaagaactcatagag
aaagtcagaaaagaacttgtcatcacaactttaactgaaccaatgcaacatgtgaagcta
atggaacttattgatgcagttcaacgtctcggtgtggcttatcattttgagttggaaatt
gaggaatccttgaaccatatctatgttacatatggggatcaatggatcgatgataacctc
caaagcacttcactgtggtttcgtctcctacgacaacatggcttcaatgttgtaagtgga
gtattcaggaagtacatggacaacaatggaaattttctggaatccttaagaaacgatgtc
gaaggcatgctttctctatacgaagcagcatacttgagggtgaagggagaagaagtttta
gatgctgccatcgaatttacaacttttgaacttgaaaacatagccaaagatcatgtaggc
aacgatgattatctcaagattcaaatacaacaagcactacaacagcctcttcaaaaaagg
ttgccaaggcttgaggcattgcgctacataccagtctatcaacatgaatcttctcataac
gaggacttactaaagcttgccaaattagatttcaacttgctccagtcattgcataggaaa
gagcttaaccaaataagcaaatggtggaagaatttggatacgccaaccaagctaccttat
gttcgagatagattggttgaaggctacttttggatattggcagcctattacgaacctcaa
tattctgatgcgaggatctttctcatgaaaacttgcaatctcgtaatcatattggatgac
acgtatgataattacggtacttatgaggagctcgagatctttactgaagctgttcaaaga
tggtctataagttgcttggacaagcttccggaatacatgaaatttatatatcaagaactt
ttggatgttcacaaagaagctgaggagttactagaaaagaaaggaatggcatatcgtagc
tactatactaaagagatggtgaaagagtacactagaaatctcctaacagaagccaaatgg
gtaaaagagggttatattccaaccatggaggaacatatgtctgtgaccctggtaacttgt
gcctatgccatgatcatcgcgaaatgttatgttcatggacatgatttggtcacagaggat
acctttaaatgggtgtccacatatcctcctcttgtcaaggcttcatgtttgattttaagg
ctcatggatgatattgctacccataaggaggaacaagaaaggaaacatgtagcttctagc
atccaatgctacatgaagcaacatggtgtctcggaggaggaaacacgtgaaatattttca
aaacaagtcgaagatgcgtggaaagttataaatcaagaatcccttaggcctactgctgtt
ccgatgcctctacttatgcctccaatcaatcttgctcgtgtatgtgacgtactttataaa
catggtgacaattataatcatgcagggaaagaaatgatccattacatcaaatcgcttctc
gtaaatcctataaatgaggcaacatttccggcgaatatagtcgccggaaatattgacgcc
ggtgattttctttccggcgggtttaccggtggattttcatttttccggcggattcaggcg
tacggaaaattttcaccagtttag
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