Cynara cardunculus var. scolymus (artichoke): 112527588
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Entry
112527588 CDS
T05604
Name
(RefSeq) (E)-beta-farnesene synthase-like
KO
K15803
(-)-germacrene D synthase [EC:
4.2.3.75
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav00909
Sesquiterpenoid and triterpenoid biosynthesis
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
112527588
Enzymes [BR:
ccav01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.3 Acting on phosphates
4.2.3.75 (-)-germacrene D synthase
112527588
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Motif
Pfam:
Terpene_synth_C
Terpene_synth
Terpene_syn_C_2
DUF6824
Anti-adapt_IraP
CDC4_D
COG3_C
Motif
Other DBs
NCBI-GeneID:
112527588
NCBI-ProteinID:
XP_024994078
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Position
LG_15
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AA seq
566 aa
AA seq
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MNSMAPVSYTSSTTDHNECKQEVIRSTVNFHRSIWGDQFLTYDERKDQAWEEEQAKELRE
KVRKELVITTLTKPMQHVKLMELIDAVQRLGVAYHFEEEIEESLNHIYVTYGDQWINDNL
QITSLWFRLLRQHGFNVSSGIFKKYMDNNGKFLESLRNDVQGMLSLYEAAYLRVEGEEVL
DAAIEFTTSELENIAKNHVGNDDSLKIQIQQALRQPLRKRLPMLEALRYIPIYEHESSHN
EDLLKLAKLDFNLVQSLHRKELSQLSKWWKNLDLSTKLPYVRDRLVEGYFWILAAYYEPQ
YSDARIFLMKTCNLVIILDDTYDNYGTYEELEIFTEAVQRWSTSCLDMLPEYMKFIYQEL
LDVHKEDEELLEKKXMAYRSYYTKEMVKEYTRNLLTEAKWVKEGYIPTIEEHMSVTLVTC
AYAMIIAKCYVHGHDSVTEDTFKWVSTYPPLVKASCLILRLMDDIATYKEEQERNHCASS
IQCYMKQHGVSEEETREVFSKQVEDAWKVINQESLRPTDVPMPLLMPPINLARVCDELYS
RGDDYNHAGKEMIHCIESLLVNPINX
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgaattccatggctcctgtttcatacacttcttcgaccaccgatcataacgagtgtaaa
caagaggttatccgcagcacagtgaacttccatcgtagcatttggggcgatcagtttctc
acatacgatgagagaaaggatcaagcatgggaggaggaacaagcaaaagagctccgagag
aaagtgagaaaagaactagtgatcacaactttaaccaaaccaatgcagcatgtgaagcta
atggaacttattgatgcggttcaacgtctcggtgtggcttatcattttgaggaggaaatt
gaggaatccttaaaccatatctatgttacatatggggatcaatggatcaatgataacctc
caaatcacttcactttggtttcgacttctacgacaacatggcttcaatgtttcaagtgga
atattcaagaagtacatggacaacaatggaaaatttctggaatccttaagaaacgatgtc
caaggcatgctttctctgtacgaagcagcatacttgagggtggagggagaagaagtttta
gatgctgccattgaatttacaacttcagaacttgaaaacatagccaaaaatcatgtgggg
aacgatgattctcttaagattcaaatacaacaagcactacgacagcctctccgaaaaagg
ttgccaatgcttgaggcgttgcgttacataccaatctatgagcatgaatcttctcataac
gaggacttgctaaagcttgccaagttagatttcaacttggtccaatcattgcataggaaa
gagcttagccaattaagcaaatggtggaagaatttggatctatctaccaagctaccttat
gttcgagatagattggttgaaggctacttctggatattggcagcctattacgaacctcaa
tattctgatgcgaggatctttctcatgaaaacttgcaatctcgtaatcatattggatgac
acgtatgataattacggtacttatgaggagctcgagatctttactgaagctgttcaaaga
tggtctacaagttgcttggatatgcttccggaatacatgaaattcatatatcaagaactt
ttggatgttcacaaagaagatgaagagttactagaaaagaagrgaatggcatatcgtagc
tactatactaaagagatggtgaaagagtacactagaaatctcctaacggaagccaaatgg
gttaaagagggttacattccaaccatagaggaacacatgtctgtgaccctggtaacttgt
gcttatgccatgatcatagcgaaatgttatgttcatggacatgattctgtcacagaggat
acctttaaatgggtgtccacatatcctcctcttgtcaaagcttcatgtttgattttaagg
ctcatggatgatattgctacctataaggaggaacaagaaaggaatcattgtgcttctagc
atccaatgctacatgaagcaacatggtgtctcggaggaggaaacacgtgaagtattttca
aaacaagtcgaagatgcgtggaaagttataaatcaagaatcccttaggcctactgatgtc
ccgatgcctctgcttatgcctccaatcaaccttgcccgtgtctgtgacgaactttattct
cgtggcgacgattataatcatgcagggaaagaaatgatccattgcatcgaatcacttctc
gtaaatcctataaatmtgtag
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