Cynara cardunculus var. scolymus (artichoke): 112527679
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Entry
112527679 CDS
T05604
Name
(RefSeq) transcription factor TCP7-like
KO
K16221
transcription factor TCP21 (protein CCA1 HIKING EXPEDITION)
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
112527679
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccav03000
]
112527679
Transcription factors [BR:
ccav03000
]
Eukaryotic type
Other transcription factors
TCP
112527679
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Gene cluster
GFIT
Motif
Pfam:
TCP
Motif
Other DBs
NCBI-GeneID:
112527679
NCBI-ProteinID:
XP_024994214
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All DBs
Position
LG 15:complement(12083029..12084624)
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AA seq
262 aa
AA seq
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MSTSEGAANALPNAGIIDTQRHQPPGNGVLSVKKPPAKDRHSKVDGRGRRIRMPIICAAR
VFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTVSVAVRNSNANSSLSAA
LDQKSTSQHHQHLISPTPFILGKRLRSEEDGLDGGGKEDNMSSATVVSAAAGGGFWALPA
RTDFGQVWSFAAAPPEMVVSSPSAMASQQGRYIHNHNQQPMGEASAARVGNYLPITQGHL
NLLASLSGPPPQSSGGKDDDTR
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacatcagaaggtgctgctaacgctcttcctaacgccggaattattgatactcag
aggcaccagccgcctggaaacggggtcttatccgtcaaaaagccgccggcaaaggatcgc
catagcaaggtcgatgggcgtggacgccgtattcgtatgccaatcatctgcgccgccagg
gtctttcagctcactcgtgagctcggtcataagtccgatggtcagaccatcgagtggctc
cttcgtcaagctgagccgtcgattattgccgccaccggcaccgggactactcctgctagc
ttctccaccgtttcggttgcggttcggaattccaacgctaattcgtctctttccgcagcg
cttgatcagaaatcgacgtcgcagcatcaccagcacttaatctctccgactccgtttatt
ctcgggaaacggcttcggtcggaagaagacggtcttgacggaggtggaaaagaggataat
atgtcttcagctactgttgttagcgccgccgccggtggagggttctgggctctgcctgcg
aggactgattttggtcaggtgtggagctttgctgcggcgccgccggagatggtcgtgtcg
tcaccgtccgccatggcatcacagcaagggaggtacatccacaaccacaatcagcaacca
atgggtgaggcgtcggcggctagggttgggaactaccttccgataacccaaggtcacttg
aatttgcttgcatcactatccggccccccaccacaatcctccggcggaaaggatgacgat
actcgctga
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