Cynara cardunculus var. scolymus (artichoke): 112527704
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Entry
112527704 CDS
T05604
Name
(RefSeq) indole-3-acetic acid-amido synthetase GH3.10
KO
K14487
auxin responsive GH3 gene family
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
112527704
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Motif
Pfam:
GH3
GH3_C
GH3_M
Motif
Other DBs
NCBI-GeneID:
112527704
NCBI-ProteinID:
XP_024994241
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Position
LG 15:complement(11532341..11541304)
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AA seq
593 aa
AA seq
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MEASSSEDMIIWFEEVAKNAGKVQMEILKKILEINHGVEYLEKWFGDIDVHKMDAEALQS
LYTSMVPLASHADLEPYIQRIADGETSPLLTKQPITTLSLSSGTTEGRQKYVPFTSHSSK
TTLQMFKLAAAYRSRVYPTKEGGKILEFIYGSKQFKTKGGLSAGTATTHYFASQEFKLKQ
QQTKSFTCSPEQVITSGDYKQSTYCHFLLGLFYSPDVEFITSTFAYCIVQALTLFEEYWI
DLCNDLSQGTLSPRITLPGIRRSVLDLIKPNTHLATWVRAKCEELEGSDWYGLIPKLWPN
CKYVYSIMTGSMQPYMEKLKHYAGDHLPLVSADYGSTESWIGVNMDPSCAPQNVTFTVVP
AFSYFEFIPLHRQHHKPCDAVVAGGGGDDYLEDDPVPLSKVKIGQQYEIVLTTFTGLYRY
RLGDVVEVSGFYKGTPKLNFLCRRKLILTVNIDKNTEQDLQLAVQKGSQPLIKSRAELVD
FTSHANIVNQPGHYVVYWEIKGVVNEDVLDQCCKEMDAAFVDHGYVVSRKTNSIGPLELC
IVERGTFKKIMEYFIGNGATMSQFKTPRCTTNQVLLKILNLYTIKRFRSTAYQ
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atggaagcaagctcaagtgaggatatgatcatttggtttgaagaagtagcaaagaatgct
gggaaggtgcaaatggaaatactgaagaaaattctggaaatcaatcatggggtggagtat
ctggagaaatggtttggtgatattgatgtgcataagatggatgcagaagcattgcagtcg
ctttacacatcaatggtgcctttggcttcccatgcagatttagagccttatattcagagg
attgctgatggagagacttctcctttactcactaagcaacccatcactactctctcttta
agctccgggacaactgaaggaagacaaaagtatgttcccttcacctcccatagctccaag
accactctacaaatgttcaagttggctgcagcatacagatcaagggtatatccgacaaaa
gaaggaggcaagattcttgagtttatctatggcagcaaacagttcaaaaccaagggtggg
ctatcggcaggcacagccactacacattactttgcaagccaggagttcaaactcaagcaa
cagcaaaccaagtctttcacttgtagccctgagcaagtcatcacgagtggcgattacaag
caatccacgtattgccacttccttctcggactcttttactctccagatgtcgagttcatc
acctccactttcgcctattgcatcgtccaagcactcaccttattcgaagagtactggata
gacctatgcaatgatctttcccaaggaactttgagtccccggatcacactcccgggtatc
aggagatccgttctggatttgataaaacccaacacacatttagcgacgtgggtaagagcg
aaatgcgaggagttagagggctcagactggtacggattgatcccaaagttgtggccaaat
tgcaagtatgtgtattcgataatgactggttcaatgcaaccctacatggagaagctaaag
cattacgcgggggaccatttgccattggtgagtgcggattacgggtccacggagagttgg
atcggggtgaacatggacccttcttgtgcaccacagaatgtgactttcaccgtggttccg
gcattttcttactttgagttcataccattacaccggcagcatcataaaccttgcgatgca
gttgttgctggtggtggtggtgacgactacctagaagacgatccagtgccattatcgaag
gtcaagattggtcaacagtacgagattgtccttaccaccttcacaggtctttacaggtat
aggctaggagatgtggtggaagtgtctggtttttacaaaggaaccccaaaactcaacttc
ttatgtagaagaaagctaatcctaacagtaaacatcgataagaatacagaacaagacctt
caactcgcagtccaaaagggctcccaaccactcatcaagtccagagccgagctagtcgac
ttcactagccacgccaacattgtaaaccagcctggtcactacgtggtgtactgggagatc
aaaggtgttgtcaatgaagatgttttggaccaatgttgcaaggaaatggatgcagcattt
gtagatcatggttatgttgtctcgaggaaaaccaactcaattggtccgttagaactttgt
attgtggaacgaggcacattcaagaagatcatggaatattttattggcaatggtgcaacg
atgagccagttcaagactccaaggtgcacaacaaatcaagttttattgaagatcctaaat
ctctacactatcaagaggtttcgtagtactgcttaccagtga
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