Cynara cardunculus var. scolymus (artichoke): 112527728
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Entry
112527728 CDS
T05604
Name
(RefSeq) uncharacterized protein LOC112527728 isoform X1
KO
K20102
YTH domain-containing family protein
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccav03019
]
112527728
Messenger RNA biogenesis [BR:
ccav03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
112527728
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
Motif
Other DBs
NCBI-GeneID:
112527728
NCBI-ProteinID:
XP_024994274
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Position
LG 15:2891116..2895670
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AA seq
688 aa
AA seq
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MDVYNVPEHGNADAYLIQGTTDPNSQLTNPLLEPLEVMYNEGAPEFVIDQGMYYPSATNY
GYICTGLESPGDWDDHHRVFGVDGQNIQFIGTQTESLPYVYYTPSYGYAQSPYNPYNPYI
PGAMIGADGSYVGTQQYYMPSYENGATSPAYFPMVVQSGPDTFTSGTTDQFMDMAASTAN
RVDASGLNRNSLSAAATFTLNPGRVASNHSNAFGKVSEGFKSNGGTNKLPTSNSSVTSNS
VSGPLPSLNLQGRGAQAIDNLSNGKTVSNHNQLKVALPSSNGMSNFGSSGNGRVVVDKAR
SKLSFSKITNDVNGNPNALTEQNRGPRTSTSNTRLTVKAYSTRAGNSDAQGNIIICMDDY
NKDDFPGEYVNAKFFVIKSYSEDDVHKSIKYNVWSSTPNGNKKLNSAYEEAQKISVGDSK
GCPIFLFFSVNASGQFCGVAEMTGHVDFHKDMDFWQQDKWSGSFPVKWHIIKDVPNPHFR
HIILENNEHKPVTNSRDTQEIKYKKGVEMLKVFKNYASKTSLLDDFMYYENRQKLLQEEK
ARLLMKSYGTPVFVPVLHPPRKLNNFFGLASSGDSKDDNDINTCSDGKVAVASEKQNMFN
VENNEDRRQVVVDGKPTEEDNDDVLRFRSLAISPERIEPKPVESSNVLTVGSMPVKVNGF
DESCGFLTVGTIPLDPKALKGGNSKKMG
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atggatgtgtataatgttcctgaacatggaaatgcagatgcttacctgattcaaggcact
actgacccaaattcacaattaaccaatccccttcttgaaccacttgaagttatgtataac
gaaggtgccccagagtttgttattgatcagggcatgtattatccttctgctaccaattat
ggctatatttgtacagggttggaatcacctggtgattgggatgaccaccatagagttttt
ggtgtggatggtcaaaatattcagttcataggcactcaaacagaaagtttgccttatgtg
tattatacacctagctatggatatgcacagtctccatataacccatacaatccttacatt
cctggtgccatgataggagctgatggctcgtatgtggggacacaacagtactacatgccc
tcttatgaaaatggtgctacttcaccagcttactttcccatggttgttcaatctggacca
gacactttcacaagtggtacgacagaccaattcatggatatggctgcatctactgctaat
agggttgatgcatcaggtctcaatcgtaactcattgtcagcagctgcaacatttaccttg
aatccaggaagggttgcttcaaatcattcaaatgcttttggcaaagtttccgaaggcttt
aaaagtaatggtggaacaaacaagttacctacgagcaatagtagtgtcacttccaacagt
gtttcaggtccgctgccatcattaaatctccagggtcggggtgctcaagctattgataat
ctttcaaatgggaaaactgtgtctaatcataaccagctaaaagttgctcttccttctagc
aatggcatgtcaaattttggttcaagcggaaatgggcgggtggtagttgataaggcccga
tccaagttatcttttagtaaaatcacaaatgatgtaaatggaaaccccaatgccttgact
gaacagaatcgtggtcctagaaccagcacatcaaatactcggttgacagttaaagcctac
tcaaccagggctggaaatagtgatgcgcaaggaaacattataatttgcatggatgactat
aacaaagatgattttcctggtgaatatgtaaatgcaaagttctttgttataaaatcatac
agtgaagatgatgttcataagagcatcaagtataatgtatggtcatctacacctaatgga
aacaagaagttgaatagtgcctatgaagaagcccagaaaatatcagtaggagactccaaa
ggctgtcctatcttcctctttttctctgttaatgcaagtgggcagttttgtggtgttgct
gagatgactggccatgtagatttccataaggatatggatttctggcagcaagacaaatgg
agtgggagtttcccagtgaagtggcatataataaaagatgtgccaaatccccactttcgt
cacatcatattagagaacaatgagcataaaccagtaacaaatagccgtgatacgcaagag
ataaaatacaaaaaaggtgtagaaatgttgaaagtattcaagaactatgcatcaaagacg
tctttacttgatgatttcatgtattatgagaatcggcaaaaactattgcaggaagagaaa
gcgaggctactaatgaagagttatggtaccccagtatttgtgcctgttctacaccctcct
cgcaagcttaataatttctttggtttggcctcgagtggagacagcaaggatgacaatgat
ataaatacttgttcagacggtaaagtagcggttgcttcagaaaagcaaaacatgtttaat
gttgaaaataacgaggatagacgacaagtagtggttgatggaaagccaacggaagaagat
aatgatgatgttttacgttttcgttcgctcgctataagcccagagcggatagaaccgaag
ccagtggagagtagtaatgttttgacggttgggtcgatgccagtgaaagtgaacgggttt
gacgagtcttgtggttttctaaccgtggggacaatcccgcttgatcccaaggctctcaag
ggtggtaattcaaaaaagatgggctaa
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