Cynara cardunculus var. scolymus (artichoke): 112527759
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Entry
112527759 CDS
T05604
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 23 isoform X1
KO
K15166
mediator of RNA polymerase II transcription subunit 23
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccav03021
]
112527759
Transcription machinery [BR:
ccav03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
112527759
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med23
Motif
Other DBs
NCBI-GeneID:
112527759
NCBI-ProteinID:
XP_024994313
LinkDB
All DBs
Position
LG 15:7128770..7148326
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AA seq
1624 aa
AA seq
DB search
MFRAPTASGGGGVPLTTITTQSPNPADMGDQSHHRAAAARAFQFHPARPAIIDLFNLYLG
RSAREKSDDLVREPPNKTQKRVTALNRDLPPRNEQFLVDFEQLLNQFPDREQLRTVSESV
LISLVIQCSGHAPRAEFILFALRNLYNIGYIHWDTFLPSLLSSVSSAEMSVGISSTASPQ
PAVSSTSLSQTGMLPSSTTIPSSSNFQALSPASPLISVHGIGSPSQSANEPSSTALSPVK
SSDINTGQHSAARSNTSTRDNAISSLRQLCCKIIFSALEVNLKPCTHADIFNHMMNWLVN
WDQQQQWSDEVDGIKSWKRDKALFEWLHSCLDVIWLLVDDNKCRVPFYELVRSGLQFLQN
ISDDEALFTLILEIHRRRDMMAMHMQMLDQHIHCPTFGNQRLLSQSTTNISGEAAINMRY
SPITYPSVLGEPLHGEDVALCIQRGSLDWERALRCIRHALRSTPAPDWWRRVLLVAPCNR
QHPQGPTPGAVFTSDMIREANIDRIVELLRLTNSEINCWQEWLIYSDVFFFLVKSGCIDF
VDFVDKLVLRLAEDDHQILRTNHVTWLLAQIIRVELVMHALNADSRKVETTRKILSFHKE
DRSSDPNNPQSILLDFISSCQNLRIWSLNSSTREYLNSEQLQKGKQIDEWWRQATKGDHM
MDYMNLDDRSIGMFWVVSYTMAQPASDTVMGWLTSAGHAEVPGPNLQSNERMSMMREVHP
VPISLLSGFSINLCLKLAFQMEEAMFSGEHVPNIAMVETYTRLLLIQPHSLFRSHLSHLH
QRNPSILNKPSATLLVLEILNYRLFSLYRYQGKSKTLMYDVTKILSTLKGKRGDHRVFRL
AENLCMNLILSLREFFFVRKEGKGPTEFTETLNRITVVNLAIIIKTRGIADAEHLLYLQT
MLEQILATSQHTWSGKTLRYFPPVLCDALIGRIDKRGLAIQAWQQAEETVIIQCTQLLTP
SANPTYVMTYINTSFPQHRQYLCAGAWVLMHGHPENINSANLGRVLREFSPEEVTANIYA
MVDVLLHNMQLELQHGHPLQDLILKACANLAYFIWNHELLPLDILILALIDRDDDPHALR
IVVNLLERQELQQRIKFYVGNHGKPEHWLQTGIFKRIELQKALGNHLSWKERYPTFFDDI
AARLLPVIPLVIYRLIENDAAEAADRVLQFYSTFLHYYPLNVTFVRDILAYFYGHLPAKL
IFRILNVLDIKKMPFSESFPQHVNSSNAMCPPLEYFASLLSNLVNNVIPQCNSKVDASSN
GLRTIINRNQTPGQPGSTNAFEGQKAFYQIQDPGTYTQLILETAIIEILSLPVSAAQIIT
ALVQIIVHIQPTLAQSNHGFHGSSTSSGQGSTLPTSPSGGSTDSLGRNRQTSVLGLNSSN
FVSRSGYASQQLSCLMIQACGLMLAQLPIEFHKQLYAEAARVIKESWWLTDGKRSTSELD
SAVGYALLDPTWAAQDNTSTVIGNVVALLHSFFSNLPQEWLDKTHLLVNHLRPIKSVAVL
RIAFRIIGPLLPRLANAHNLFTKTLELLLNMMVDVFGRNSQPSTPVEASEITDLIDFLHH
IIHYEGQGGPVQPNSKARPDVLALCGRAIEDLRTDVQHLLSHLKTDANGSIYAATHPKLF
QSPS
NT seq
4875 nt
NT seq
+upstream
nt +downstream
nt
atgttcagagctccgacagctagtggtggtggtggggtacctttaacaaccatcaccact
caatcaccaaatccggcagacatgggggatcagagccaccaccgagctgctgccgccagg
gcttttcagttccatccggcccgaccagctataatcgacctgtttaatctatacctcggt
cgaagtgcccgcgaaaagtcagacgatttagtccgagaacctccgaacaagacgcagaag
cgagttactgctcttaacagagaccttcctccgcgcaatgaacaatttcttgtagatttt
gagcagcttcttaatcaatttcctgaccgggaacaattacgaactgtgtcagaatctgtg
cttatctcactggttatccagtgtagtggtcatgcaccaagggcagaatttattcttttt
gctttgcgtaatttgtacaacatcggttacatacactgggacacctttctaccatctctt
ctgtcttcggtttcatctgcagagatgtcagttggtatctcctctactgcttcaccacag
cctgctgtctcttctacatctttatcacaaactggaatgttaccatcatctaccacaatt
cccagttcttccaattttcaggctttaagtccagcatctcctttgatttcagttcatgga
attggatccccatctcaatcagcaaatgaaccatcatctacagctttatcacctgtaaaa
tcatcagatataaacacgggccagcattctgcggcaagaagtaacacgtcaacaagagat
aacgctataagcagtttgcgccagttgtgttgcaagattatcttttctgccttagaagtc
aatttaaaaccatgtactcatgctgatattttcaaccacatgatgaattggctggttaac
tgggaccagcagcaacagtggagcgatgaggttgatggaataaaatcatggaaacgggat
aaggccttatttgaatggctacacagttgtttagatgtgatttggcttttggttgatgat
aacaaatgccgtgttcccttttatgaattagtacgaagtggactgcagtttttacaaaat
atatcagatgatgaggcactattcacacttattttggagattcacaggagaagagatatg
atggctatgcacatgcaaatgttagatcaacatattcactgcccgacatttgggaatcag
cggcttctatctcagtctacaaccaatatatcaggtgaagcagccataaatatgagatat
tcacctattacatatccaagtgtgcttggagaaccgctgcatggagaggatgttgcttta
tgtattcagagaggaagtctggattgggagagagctcttcgctgtatcaggcatgcactt
cgtagtactccagcgcctgactggtggaggcgtgtgcttcttgtggcaccttgtaaccga
caacacccacaaggacctactcctggtgctgtctttacttcagacatgatccgtgaggca
aacattgataggattgttgaactcttgaggttgacaaattcagagataaattgctggcag
gagtggcttatctattcagatgtattttttttccttgtgaaaagtggttgcatagatttt
gttgattttgtggacaagttagttttacgcctagccgaggatgatcaccagattcttagg
acgaatcatgtcacatggttgcttgcacagattattcgggttgaactcgtaatgcatgct
ttaaatgcagactctagaaaggtggaaacaaccaggaaaattttgtcgtttcataaagaa
gatcgaagctctgatcctaataatccccaaagtatcctgcttgatttcataagcagttgt
cagaatcttcgcatatggtcattgaactcttcgacccgagaatatttgaatagtgagcag
cttcagaaaggaaagcaaatagatgaatggtggaggcaagcaactaaaggggatcatatg
atggactacatgaatctggatgataggtcgattgggatgttttgggttgtgtcctacaca
atggcccagcctgcttctgacacagtaatgggttggttaacatctgcgggacatgcagaa
gtaccaggaccaaatctacagtcgaatgagagaatgtcaatgatgcgagaagttcaccct
gtgccaatatcattgttgtcaggattttcaattaacttgtgtctgaagctggcttttcaa
atggaagaggctatgttctctggtgagcatgtgcctaacattgcgatggtcgaaacatat
actagattgctgctcattcaacctcattcgttgttccgttcgcatttaagtcatctccat
cagaggaacccatctatcttaaataagccatctgctactcttttagtgcttgaaattctc
aactatcgtttattttccctatacaggtaccaagggaaaagcaagacattaatgtatgat
gtcaccaaaattctctctactctaaaaggcaagcgcggagatcatcgtgtgtttcggttg
gcagaaaacctgtgcatgaatctcattttatcattgagagagttcttttttgtgaggaag
gaaggaaagggtcccactgaattcacagaaacattgaatcgcataactgtagtgaatctt
gctattatcatcaagactcgtggaattgctgatgctgaacaccttctctatcttcaaaca
atgttggaacaaatcttggccactagccagcacacttggtcaggaaagaccctccgttac
tttccacctgttctatgtgatgccttgattgggaggatagacaagaggggcctagcaatc
caagcatggcagcaggcagaagaaactgttattattcagtgtacacagctcctcacacca
tcagctaatcctacttacgtcatgacctatattaataccagttttcctcaacaccgacaa
tatctatgtgctggagcatgggtactgatgcatggacaccctgagaacattaatagcgca
aacctgggacgtgttctgagagaattttctcctgaagaagtgactgcaaatatatatgct
atggtcgatgtccttcttcataatatgcagttggagctacagcatggacatcccttgcag
gatcttatattgaaggcttgtgcaaatctagcatacttcatttggaaccatgagttgctt
ccgttggacattttgattttggcactaattgaccgtgatgatgatccacacgctttgcga
attgtggttaatttgcttgaacgacaagagcttcaacagagaataaagttttatgttggt
aaccatggcaagcctgagcattggcttcaaactggaattttcaagcgtattgagttgcaa
aaggctctcggcaatcatttgtcatggaaggaaaggtatccaacatttttcgatgatatt
gcagcacgtttactgcctgttatccctttggtcatctataggcttattgaaaacgatgct
gcagaagcagctgatagagttcttcaattttattcaacattccttcattactatccttta
aatgttacatttgttcgtgatatacttgcgtatttctacggacatcttccagcaaagctc
atcttccgaatactgaatgtgctcgatataaaaaagatgccattttctgagtcatttcca
cagcatgttaattcgtcaaatgccatgtgcccaccattggagtactttgcatctctttta
tctaacctcgtgaacaatgtcatccctcaatgcaactcgaaagtggatgcttcaagcaac
ggtctgcgtaccatcattaatagaaaccagacacctggtcagcctgggtccacaaacgcc
tttgaaggtcaaaaagcattctatcagatacaagatcctggcacatatactcaacttatt
cttgaaaccgcaattatagaaatcctctctctccccgtatcagcagcacagatcataaca
gcacttgtacagattattgttcacatacaaccaactcttgcacaatctaaccatggtttc
catggatcttcgaccagttcaggccaaggttctactttgccaacttccccatcaggggga
agcactgattcattagggagaaacagacagacttctgttttgggattaaactcttctaac
tttgtttcacggagcggttatgcaagccagcaactgtcttgcttgatgatccaagcttgt
ggcctcatgttggctcagcttcctatcgaattccataaacagctttatgcagaggcggca
cgtgtgatcaaagagagttggtggcttacagatggtaagagatctactagcgagctagat
tctgctgttggttatgctttgttggatccaacatgggctgctcaagataatacctccacc
gtcattggaaatgtggtggctctgcttcattcattcttcagtaatcttccacaggaatgg
ttagataaaacacatctcctggtaaaccatctacgtcccataaaatcagtcgcagtgctg
agaatagcctttcgtatcattggtccattgctgccaagattagcaaatgctcacaatttg
ttcaccaagaccctagaactgcttttaaacatgatggtggacgtctttgggaggaactct
cagccttcaactcccgtcgaagcatcagaaataaccgaccttattgacttccttcatcat
atcatacattatgaaggtcagggaggccctgtacagccaaattcgaaagcaagaccagat
gtattggctttatgcggaagagccattgaagatttgcgcaccgatgtgcagcatcttctt
tctcacctgaaaactgatgcaaatggttctatttatgctgctactcatccgaagctcttt
cagagtccatcttga
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integrated database retrieval system
