KEGG   Cynara cardunculus var. scolymus (artichoke): 112527833
Entry
112527833         CDS       T05604                                 
Name
(RefSeq) DNA polymerase epsilon subunit B
  KO
K02325  DNA polymerase epsilon subunit 2 [EC:2.7.7.7]
Organism
ccav  Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03030  DNA replication
ccav03410  Base excision repair
ccav03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ccav00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    112527833
   03410 Base excision repair
    112527833
   03420 Nucleotide excision repair
    112527833
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ccav03032]
    112527833
   03400 DNA repair and recombination proteins [BR:ccav03400]
    112527833
Enzymes [BR:ccav01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     112527833
DNA replication proteins [BR:ccav03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    112527833
DNA repair and recombination proteins [BR:ccav03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      112527833
SSDB
Motif
Pfam: DNA_pol_E_B Dpoe2NT CcmE
Other DBs
NCBI-GeneID: 112527833
NCBI-ProteinID: XP_024994432
LinkDB
Position
LG 1:complement(46485907..46494702)
AA seq 532 aa
MSGTMRNKVQRKCKMRGYTLKVEALNEILSFLSNYEDAEDEALDLLLDELQHQSSRVAVK
SSILDKEPVQRVVSLLCEAGSAAEDNLSTSTTSSFSVIDAFLIPKFRYDPIRKMFCEHTG
RLPIHGDAPAKAWLYRDRFLLLSQRLSRIPQFSSPSFNTELSEFGSCQISQIQSLVGRTG
ISWVMGVISQLEDGHFYLEDLTAAVEINLSNAKITTGYFSENTIVLAQGEMMLDGTFQVQ
TFGFPPLEDREKSASMFTGLDYFGGGTLPKEDTLRLAEMESRAVNEMFVILSDIWLDHEE
TMAKLETVLDGYEDVEVVPSLFVLMGNFCSHPFNLSYNSFSSIRLNFGKLGQMIGNHPRL
KEHSRFLFIPGPDDAGPSTVLPRCALPKYITEELQKHIPNAIFASNPCRIKFYTQEIVFF
RQDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLSVQPIIWNYDHCLHLYP
TPHTIVLGDNSEQKAFKYTDITCFNPGSFSNDSTFVVYRPCNREVELSALDA
NT seq 1599 nt   +upstreamnt  +downstreamnt
atgagtggaacgatgagaaacaaagtgcagaggaaatgcaaaatgagaggttatactctt
aaagtagaagccctaaacgagatcctttctttcttgagcaactatgaagatgccgaagat
gaagctcttgatctcctcctcgatgaactccaacaccaatcatctagggtagcagtgaag
tcttcaattctggataaggagcctgtacagcgtgtcgtaagcctgctttgtgaagctgga
tctgcagctgaggataatcttagtacaagtacgacttcatctttcagcgtaattgacgcc
tttctcattccaaagttccgctatgatcctatcagaaagatgttttgcgaacacacaggg
agacttccgattcacggtgatgctcctgcaaaagcttggctgtacagggatagatttctt
ttgttgtctcagaggctatctcgtattccacaattttctagtccttcatttaatactgaa
ttatctgagtttgggagctgtcagatatctcaaattcaatctctggttggacgtactgga
ataagctgggtgatgggtgtcatatctcaattggaagatggccacttttacctggaagac
cttacggcagctgttgaaatcaatctgtccaatgcaaagataacaacagggtatttttct
gagaacaccatagttttagctcaaggggagatgatgttagatggtactttccaggttcaa
acatttggttttccaccattagaagacagagagaagtcagcctctatgtttacggggctt
gattatttcggtggtggtacacttcccaaagaggacactcttagacttgcagagatggaa
tcaagagcagtcaatgaaatgtttgtcatactgtctgacatatggctggaccatgaggag
accatggcaaagctagagactgtgctagatggttatgaagatgttgaggtggttccttct
ctcttcgtgttgatgggaaatttctgttcccatccatttaacctttcatataattctttc
tcaagtatcagattgaattttggaaaacttgggcaaatgattggaaaccatccacggttg
aaagagcacagtagattccttttcattcctggacctgatgatgcaggcccttcaacggtt
ctacctaggtgtgcgttacccaaatatataactgaagagctccagaagcacatcccaaat
gccatttttgcaagcaatccatgcagaatcaagttctatactcaggaaatagtatttttc
cgccaggatctactttacagaatgagacgatcttgtttgattcctccttcaacagaagaa
accagtgatccttttgagcatcttgttgctaccataacacatcaaagtcatctctgtcct
cttcctttgagtgtacagccaattatctggaattatgaccattgtctccacctctatcca
actccacatacgattgtattgggtgacaatagcgaacagaaggctttcaagtacaccgat
attacttgcttcaatccgggttctttctcaaatgacagcacttttgtggtatatcgacct
tgcaatcgagaagttgaactctcggccctcgatgcttaa

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